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Os01g0171800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0271) R2 : 0.858
β1 : -1.22 (0.0992) R2dD : 0.0491 R2D : 0.0379
β2 : 3.6 (0.0703) R2dC : 0.822 R2C : 0.808
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.235 (0.0578) R2dN8 : 0.00689 R2N8 : -0.00827
σ : 0.509
deviance : 118.32
__
_____
C
peak time of C : 6.98
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
97.51 0.464 11.4 -1.19 3.79 -0.591 2.07 0.0326 -0.347 6.67 83.66 8 -- --
97.51 0.46 11.4 -1.18 3.79 -0.589 2.07 -- -0.348 6.67 83.86 7 -- --
108.02 0.484 11.4 -1.18 3.81 -0.592 -- 0.126 -0.328 6.6 80.35 10 -- --
108.06 0.484 11.4 -1.17 3.81 -0.599 -- -- -0.331 6.59 80.17 8 -- --
432.25 0.968 11.4 -1.05 -- 3.24 -- 0.533 0.171 -- 65 515 -- --
107.69 0.487 11.4 -1.26 3.59 -- 2.02 -- -0.23 7.01 -- -- -- --
118.32 0.509 11.4 -1.22 3.6 -- -- -- -0.235 6.98 -- -- -- --
429.35 0.965 11.4 -1.2 -- 3.32 -- -- 0.0323 -- 65 515 -- --
143.15 0.56 11.4 -- 3.83 -0.695 -- -- -0.244 6.6 83.67 15 -- --
799.2 1.32 11.5 -1.15 -- -- -- -- -0.168 -- -- -- -- --
157.74 0.588 11.3 -- 3.59 -- -- -- -0.0989 7 -- -- -- --
467.44 1.01 11.4 -- -- 3.35 -- -- 0.149 -- 64.08 519 -- --
834.05 1.35 11.4 -- -- -- -- -- -0.041 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.21 precipitation 0.1 90 < th dose independent rect. 17 20
2 85.21 precipitation 0.1 90 < th dose dependent rect. 17 20
3 85.33 humidity 50.0 90 > th dose dependent rect. 13 4
4 85.60 temperature 30.0 90 < th dose independent rect. 13 4
5 85.63 precipitation 0.1 270 < th dose independent rect. 15 22
6 85.63 precipitation 0.1 270 < th dose dependent rect. 15 22
9 85.81 wind 9.0 90 < th dose independent rect. 13 4
10 85.97 wind 1.0 90 > th dose independent rect. 13 4
11 86.39 radiation 40.0 90 < th dose independent rect. 13 4
12 86.43 humidity 50.0 90 > th dose independent rect. 13 4
13 86.55 temperature 10.0 90 > th dose independent rect. 13 4
15 86.55 atmosphere 1010.0 90 < th dose independent rect. 13 4
17 86.55 temperature 10.0 90 > th dose independent rect. 17 20
18 86.60 atmosphere 995.0 90 > th dose independent rect. 13 4
19 86.72 atmosphere 995.0 90 > th dose independent rect. 17 20
20 86.78 precipitation 0.1 90 < th dose independent rect. 13 4
21 86.78 precipitation 0.1 90 < th dose dependent rect. 13 4
22 86.91 wind 9.0 270 < th dose independent rect. 22 18
23 87.00 wind 9.0 270 < th dose independent rect. 13 2
26 87.17 wind 1.0 270 > th dose independent rect. 13 2
27 87.20 wind 9.0 90 < th dose independent rect. 17 20
30 87.25 atmosphere 995.0 90 > th dose dependent rect. 13 4
31 87.37 atmosphere 995.0 270 > th dose independent rect. 13 2
32 87.37 precipitation 0.1 270 < th dose independent rect. 2 10
33 87.37 precipitation 0.1 270 < th dose dependent rect. 2 10
36 87.46 humidity 50.0 90 > th dose independent rect. 17 20
37 87.49 temperature 10.0 270 > th dose independent rect. 13 2
39 87.49 atmosphere 1010.0 270 < th dose independent rect. 13 2
41 87.49 temperature 10.0 270 > th dose independent rect. 15 22
42 87.69 wind 9.0 90 < th dose independent rect. 1 16
45 87.71 wind 1.0 90 > th dose independent rect. 17 8
46 87.73 precipitation 0.1 270 < th dose independent rect. 13 2
47 87.73 precipitation 0.1 270 < th dose dependent rect. 13 2
48 87.74 precipitation 0.1 270 < th dose independent rect. 16 6
49 87.74 precipitation 0.1 270 < th dose dependent rect. 16 6
53 87.84 radiation 40.0 90 < th dose dependent rect. 13 4
55 87.90 humidity 50.0 270 > th dose independent rect. 22 18
57 87.94 humidity 50.0 270 > th dose independent rect. 13 2
65 88.11 atmosphere 995.0 270 > th dose dependent rect. 13 1
66 88.12 temperature 10.0 270 > th dose independent rect. 16 6
67 88.12 radiation 40.0 270 < th dose independent rect. 16 6
68 88.12 temperature 10.0 270 > th dose independent rect. 22 18
69 88.12 humidity 50.0 10 > th dose dependent rect. 13 4
72 88.17 atmosphere 995.0 270 > th dose independent rect. 22 18
73 88.20 humidity 90.0 90 < th dose independent rect. 13 4
85 88.27 precipitation 0.1 90 < th dose independent rect. 17 8
86 88.27 precipitation 0.1 90 < th dose dependent rect. 17 8
87 88.33 temperature 30.0 10 < th dose independent rect. 13 5
88 88.33 wind 9.0 270 < th dose independent rect. 12 14
91 88.35 wind 9.0 270 < th dose independent rect. 21 20
92 88.36 humidity 90.0 270 < th dose independent rect. 13 2
97 88.42 atmosphere 1015.0 270 < th dose independent rect. 22 18
99 88.45 wind 1.0 270 > th dose independent rect. 16 6
104 88.49 wind 1.0 90 > th dose dependent rect. 13 4
115 88.59 wind 1.0 90 > th dose independent rect. 17 20
130 88.73 radiation 20.0 90 < th dose independent rect. 17 8
133 88.73 temperature 10.0 90 > th dose independent rect. 1 16
134 88.73 atmosphere 1015.0 90 < th dose independent rect. 1 16
135 88.73 precipitation 0.1 10 < th dose independent rect. 18 19
136 88.73 precipitation 0.1 10 < th dose dependent rect. 18 19
139 88.75 wind 9.0 270 < th dose independent rect. 16 6
140 88.75 humidity 50.0 90 > th dose independent rect. 24 17
143 88.78 radiation 40.0 270 < th dose dependent rect. 16 6
151 88.80 atmosphere 995.0 270 > th dose independent rect. 16 6
170 88.98 wind 9.0 10 < th dose independent rect. 13 5
174 89.00 atmosphere 995.0 90 > th dose independent rect. 24 17
191 89.08 wind 9.0 90 < th dose independent rect. 17 8
212 89.26 precipitation 0.1 270 < th dose independent rect. 22 18
213 89.26 precipitation 0.1 270 < th dose dependent rect. 22 18
215 89.28 humidity 50.0 90 > th dose independent rect. 17 7
227 89.40 radiation 20.0 10 < th dose dependent rect. 13 4
229 89.42 precipitation 0.1 270 < th dose independent rect. 17 4
235 89.42 precipitation 0.1 270 < th dose dependent rect. 17 4
243 89.48 humidity 50.0 10 > th dose independent rect. 13 5
257 89.63 temperature 10.0 10 > th dose independent rect. 13 5
259 89.63 atmosphere 1010.0 10 < th dose independent rect. 13 5
262 89.63 temperature 10.0 10 > th dose independent rect. 18 19
263 89.65 atmosphere 995.0 10 > th dose independent rect. 18 19
268 89.68 temperature 10.0 270 > th dose independent rect. 2 10
269 89.68 atmosphere 995.0 270 > th dose independent rect. 2 10
270 89.68 atmosphere 1015.0 270 < th dose independent rect. 2 10
271 89.68 temperature 10.0 270 > th dose independent rect. 12 14
282 89.70 atmosphere 995.0 10 > th dose dependent rect. 13 5
284 89.71 atmosphere 995.0 10 > th dose independent rect. 13 5
289 89.74 temperature 30.0 90 < th dose dependent rect. 13 4
291 89.75 atmosphere 1015.0 270 < th dose independent rect. 16 6
292 89.76 precipitation 0.1 10 < th dose independent rect. 13 5
294 89.76 precipitation 0.1 10 < th dose dependent rect. 13 5
295 89.77 temperature 10.0 270 > th dose independent rect. 17 4
296 89.77 radiation 20.0 270 < th dose independent rect. 17 4
300 89.77 temperature 10.0 270 > th dose independent rect. 21 20
305 89.79 wind 1.0 270 > th dose independent rect. 17 4
306 89.82 humidity 50.0 10 > th dose independent rect. 14 3
310 89.83 atmosphere 995.0 270 > th dose independent rect. 15 22
312 89.85 humidity 90.0 30 < th dose independent rect. 18 19
323 89.91 wind 1.0 270 > th dose independent rect. 15 21
325 89.92 precipitation 0.1 90 < th dose independent rect. 24 17
327 89.92 precipitation 0.1 90 < th dose dependent rect. 24 17
332 89.97 wind 9.0 10 < th dose independent rect. 18 19
344 90.04 atmosphere 995.0 270 > th dose independent rect. 21 20
362 90.11 wind 9.0 270 < th dose independent rect. 17 4
363 90.11 humidity 50.0 270 > th dose dependent rect. 13 1
364 90.12 wind 9.0 270 < th dose independent rect. 2 10
368 90.15 radiation 40.0 270 < th dose dependent rect. 17 4
369 90.16 atmosphere 995.0 270 > th dose independent rect. 17 4
374 90.17 radiation 10.0 10 < th dose dependent rect. 17 8
377 90.22 temperature 15.0 10 > th dose independent rect. 18 7
381 90.23 wind 9.0 10 < th dose independent rect. 1 17
385 90.26 radiation 40.0 270 < th dose independent rect. 16 19
403 90.33 atmosphere 1005.0 270 > th dose independent rect. 13 1
406 90.34 temperature 30.0 10 < th dose dependent rect. 13 4
430 90.43 humidity 50.0 270 > th dose independent rect. 17 4
435 90.45 atmosphere 1015.0 90 < th dose independent rect. 17 20
444 90.49 atmosphere 1015.0 270 < th dose independent rect. 17 4
462 90.57 wind 1.0 90 > th dose independent rect. 1 16
473 90.62 atmosphere 1015.0 90 < th dose dependent rect. 13 4
477 90.65 radiation 1.0 30 > th dose independent rect. 5 9
493 90.66 temperature 30.0 90 < th dose independent rect. 17 20
524 90.76 humidity 50.0 10 > th dose independent rect. 18 7
529 90.76 temperature 10.0 10 > th dose independent rect. 1 17
531 90.76 atmosphere 1015.0 10 < th dose independent rect. 1 17
532 90.76 temperature 10.0 90 > th dose dependent rect. 17 7
552 90.80 atmosphere 995.0 10 > th dose independent rect. 18 7
574 90.89 temperature 10.0 1440 > th dose independent rect. 14 4
578 90.89 temperature 10.0 1440 > th dose independent rect. 18 20
582 90.92 precipitation 0.1 270 < th dose independent rect. 21 20
583 90.92 wind 9.0 270 < th dose dependent rect. 13 2
585 90.92 precipitation 0.1 270 < th dose dependent rect. 21 20
586 90.93 atmosphere 995.0 10 > th dose independent rect. 1 17
588 90.94 radiation 1.0 270 > th dose independent rect. 13 2
632 91.05 wind 9.0 10 < th dose independent rect. 18 7
674 91.16 wind 1.0 10 > th dose dependent rect. 14 3
676 91.16 radiation 10.0 43200 < th dose dependent rect. 19 7
790 91.47 humidity 90.0 270 < th dose independent rect. 16 7
815 91.49 atmosphere 995.0 1440 > th dose independent rect. 19 19
837 91.55 temperature 10.0 1440 > th dose independent rect. 18 8
840 91.55 humidity 50.0 1440 > th dose independent rect. 18 8
842 91.55 radiation 20.0 1440 < th dose independent rect. 18 8
854 91.55 temperature 10.0 1440 > th dose independent rect. 2 16
992 91.85 atmosphere 1010.0 10 < th dose independent rect. 18 7