Os01g0165100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0165100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 176.86 | 0.625 | 3.23 | -0.616 | 0.454 | -0.74 | -1.7 | -0.0573 | -0.00956 | 23.5 | 1015 | 4344 | -- | -- |
| 176.87 | 0.619 | 3.23 | -0.62 | 0.454 | -0.724 | -1.7 | -- | -0.00957 | 23.5 | 1015 | 4346 | -- | -- |
| 188.82 | 0.64 | 3.22 | -0.48 | 0.452 | -0.571 | -- | -0.0326 | 0.00542 | 23.4 | 1014 | 6158 | -- | -- |
| 185.71 | 0.635 | 3.21 | -0.274 | 0.464 | -0.607 | -- | -- | 0.0844 | 23.1 | 1013 | 9489 | -- | -- |
| 199.16 | 0.657 | 3.22 | -0.342 | -- | -0.66 | -- | -0.408 | 0.0409 | -- | 1013 | 9022 | -- | -- |
| 191.34 | 0.648 | 3.25 | -0.656 | 0.455 | -- | -1.64 | -- | -0.102 | 23.3 | -- | -- | -- | -- |
| 202.83 | 0.667 | 3.25 | -0.589 | 0.463 | -- | -- | -- | -0.0951 | 23.2 | -- | -- | -- | -- |
| 199.45 | 0.658 | 3.2 | -0.244 | -- | -0.626 | -- | -- | 0.086 | -- | 1013 | 8899 | -- | -- |
| 187.35 | 0.637 | 3.21 | -- | 0.473 | -0.666 | -- | -- | 0.116 | 23.3 | 1013 | 8925 | -- | -- |
| 216.22 | 0.687 | 3.23 | -0.578 | -- | -- | -- | -- | -0.0911 | -- | -- | -- | -- | -- |
| 211.99 | 0.681 | 3.23 | -- | 0.457 | -- | -- | -- | -0.0295 | 23.1 | -- | -- | -- | -- |
| 200.75 | 0.66 | 3.19 | -- | -- | -0.691 | -- | -- | 0.129 | -- | 1013 | 8910 | -- | -- |
| 225.04 | 0.7 | 3.22 | -- | -- | -- | -- | -- | -0.0269 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.73 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 2 | 175.76 | radiation | 1 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 3 | 175.78 | radiation | 1 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 6 | 175.94 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 8 | 176.16 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 9 | 176.18 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 10 | 176.19 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 12 | 176.19 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 13 | 176.20 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 29 | 176.35 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 20 | 9 |
| 55 | 176.44 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 20 | 9 |
| 69 | 176.50 | atmosphere | 1015 | 4320 | < th | dose independent | sin | 12 | NA |
| 87 | 176.54 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 89 | 176.54 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 97 | 176.57 | atmosphere | 1015 | 4320 | > th | dose independent | sin | 12 | NA |
| 112 | 176.59 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 20 | 17 |
| 159 | 176.68 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 20 | 17 |
| 161 | 176.68 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 20 | 19 |
| 163 | 176.68 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 197 | 176.72 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 210 | 176.72 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 211 | 176.72 | wind | 7 | 14400 | > th | dose dependent | rect. | 12 | 6 |
| 212 | 176.72 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 257 | 176.76 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 2 | 3 |
| 268 | 176.77 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 10 | 22 |
| 316 | 176.82 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 320 | 176.82 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 10 | 22 |
| 356 | 176.86 | wind | 9 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 367 | 176.86 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 371 | 176.87 | atmosphere | 1015 | 4320 | < th | dose independent | no | NA | NA |
| 387 | 176.87 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 14 | 9 |
| 405 | 176.89 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 415 | 176.90 | wind | 9 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 431 | 176.91 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 445 | 176.91 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 1 | 23 |
| 471 | 176.93 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 6 | 22 |
| 477 | 176.94 | atmosphere | 1015 | 4320 | > th | dose independent | no | NA | NA |
| 479 | 176.94 | wind | 9 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 547 | 176.98 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 562 | 176.99 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 4 |
| 571 | 177.00 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 607 | 177.04 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 639 | 177.07 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 696 | 177.11 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 699 | 177.11 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 21 | 11 |
| 766 | 177.18 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 790 | 177.20 | radiation | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 812 | 177.21 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 12 | 4 |
| 890 | 177.27 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 929 | 177.30 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 22 | 15 |
| 933 | 177.31 | atmosphere | 1010 | 14400 | > th | dose dependent | sin | 9 | NA |
| 968 | 177.32 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 9 |