Os01g0160100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) (Fragment).
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Os01g0160100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.75 | 0.384 | 9.27 | 0.131 | 0.576 | 0.582 | -0.074 | 1.21 | 0.0387 | 14.3 | 70 | 4310 | -- | -- |
| 68.53 | 0.386 | 9.26 | 0.0704 | 0.589 | 0.656 | -0.0705 | -- | 0.0648 | 14.2 | 68.95 | 4226 | -- | -- |
| 66.77 | 0.381 | 9.27 | 0.129 | 0.576 | 0.584 | -- | 1.2 | 0.0384 | 14.3 | 70 | 4310 | -- | -- |
| 68.55 | 0.386 | 9.26 | 0.0684 | 0.59 | 0.656 | -- | -- | 0.0642 | 14.3 | 69 | 4224 | -- | -- |
| 83.94 | 0.427 | 9.28 | 0.0912 | -- | 0.726 | -- | 0.91 | -0.00961 | -- | 70.67 | 4615 | -- | -- |
| 76.34 | 0.41 | 9.26 | 0.0749 | 0.556 | -- | -0.145 | -- | 0.08 | 14.2 | -- | -- | -- | -- |
| 76.42 | 0.409 | 9.26 | 0.0708 | 0.556 | -- | -- | -- | 0.0792 | 14.2 | -- | -- | -- | -- |
| 84.21 | 0.429 | 9.26 | 0.0302 | -- | 0.337 | -- | -- | 0.0918 | -- | 71.08 | 6111 | -- | -- |
| 68.68 | 0.386 | 9.26 | -- | 0.588 | 0.657 | -- | -- | 0.0565 | 14.2 | 68.81 | 4224 | -- | -- |
| 94.84 | 0.455 | 9.26 | 0.0475 | -- | -- | -- | -- | 0.0657 | -- | -- | -- | -- | -- |
| 76.55 | 0.409 | 9.26 | -- | 0.555 | -- | -- | -- | 0.0713 | 14.2 | -- | -- | -- | -- |
| 84.23 | 0.429 | 9.26 | -- | -- | 0.338 | -- | -- | 0.0885 | -- | 71.08 | 6111 | -- | -- |
| 94.9 | 0.455 | 9.26 | -- | -- | -- | -- | -- | 0.0605 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.56 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 2 | 65.56 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 16 | 12 |
| 3 | 65.68 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 7 | 65.91 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 8 |
| 8 | 65.92 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 9 | 65.95 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 6 | 8 |
| 10 | 65.95 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 14 | 65.95 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 22 | 16 |
| 35 | 66.03 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 19 |
| 36 | 66.05 | humidity | 70.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 37 | 66.05 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 39 | 66.05 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 41 | 66.05 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 42 | 66.05 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 43 | 66.06 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 6 |
| 45 | 66.08 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 8 |
| 59 | 66.11 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 65 | 66.17 | humidity | 70.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 67 | 66.17 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 9 | 4 |
| 101 | 66.25 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 103 | 66.26 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 122 | 66.33 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 8 |
| 126 | 66.34 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 7 | 7 |
| 136 | 66.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 143 | 66.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 151 | 66.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 159 | 66.39 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 10 | 3 |
| 201 | 66.49 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 206 | 66.50 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 208 | 66.51 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 232 | 66.54 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 242 | 66.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 245 | 66.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 3 |
| 265 | 66.60 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 14 |
| 273 | 66.62 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 284 | 66.62 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 24 | 10 |
| 304 | 66.64 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 320 | 66.66 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 19 |
| 340 | 66.67 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 3 | NA |
| 341 | 66.67 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 350 | 66.68 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 10 |
| 351 | 66.68 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 353 | 66.68 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 14 |
| 354 | 66.68 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 19 |
| 373 | 66.70 | wind | 1.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 390 | 66.73 | wind | 9.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 416 | 66.75 | humidity | 70.0 | 4320 | < th | dose independent | no | NA | NA |
| 420 | 66.75 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 15 |
| 535 | 66.76 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 576 | 66.78 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 12 | 23 |
| 591 | 66.79 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 19 |
| 593 | 66.79 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 2 | 21 |
| 614 | 66.80 | humidity | 70.0 | 4320 | > th | dose independent | no | NA | NA |
| 702 | 66.81 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 727 | 66.84 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 735 | 66.85 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 737 | 66.85 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 761 | 66.87 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 12 | 23 |
| 771 | 66.88 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 777 | 66.89 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 800 | 66.91 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 825 | 66.93 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 826 | 66.93 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 892 | 66.98 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 899 | 66.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 15 |
| 964 | 67.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 981 | 67.03 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 17 |