BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0160100 Os01g0160100|AK069905
(597 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33070.1 | chr4:15952519-15954676 REVERSE LENGTH=608 875 0.0
AT5G54960.1 | chr5:22310858-22312681 REVERSE LENGTH=608 875 0.0
AT5G01320.1 | chr5:129484-131625 REVERSE LENGTH=604 864 0.0
AT5G01330.1 | chr5:132538-134807 REVERSE LENGTH=593 843 0.0
>AT4G33070.1 | chr4:15952519-15954676 REVERSE LENGTH=608
Length = 607
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/569 (73%), Positives = 465/569 (81%), Gaps = 7/569 (1%)
Query: 29 TLGRHLARRLAEVGARDVFTVPGDFNLTXXXXXXXXXXXXXXXVRLVGCCNELNXXXXXX 88
TLGRHLARRL + G DVF+VPGDFNLT + L+GCCNELN
Sbjct: 46 TLGRHLARRLVQAGVTDVFSVPGDFNLTLLDHLMAEPD-----LNLIGCCNELNAGYAAD 100
Query: 89 XXXXXXXXXXXXXXXTFTVGGLSAINAVAGAFSENLPVVCIVGGPNSNDYGSNRILHHTI 148
TFTVGGLS +NA+AGA+SENLP++CIVGGPNSNDYG+NRILHHTI
Sbjct: 101 GYARSRGVGACVV--TFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTI 158
Query: 149 GLPDFTQELRCFQTVTCYQAVVNNLEDAHEQIDAAISTAIKESKPVYISISCNLPSIPHP 208
GLPDF+QELRCFQTVTCYQAVVNNL+DAHEQID AISTA+KESKPVYIS+SCNL +IPH
Sbjct: 159 GLPDFSQELRCFQTVTCYQAVVNNLDDAHEQIDKAISTALKESKPVYISVSCNLAAIPHH 218
Query: 209 TFSRHPVPFFLSPRLSNQMNLEAAVETAAAFLNKAVKPVLVGGPKMRVAKACKSFVELAD 268
TFSR PVPF L+PRLSN+M LEAAVE FLNKAVKPV+VGGPK+RVAKAC +FVELAD
Sbjct: 219 TFSRDPVPFSLAPRLSNKMGLEAAVEATLEFLNKAVKPVMVGGPKLRVAKACDAFVELAD 278
Query: 269 ACGYPVAVMPSAKGLVPEHHPRFIGTYWGAVSTPFCAEIVESADAYLFAGPIFNDYSSVG 328
A GY +A+MPSAKG VPEHHP FIGTYWGAVSTPFC+EIVESADAY+FAGPIFNDYSSVG
Sbjct: 279 ASGYALAMMPSAKGFVPEHHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVG 338
Query: 329 YSLLLKKEKAIIVQPDRVVIGHGPAFGCVLMKDFLHALSARLKKNTAAYENYRRIYVXXX 388
YSLLLKKEKAI+VQPDR+ + +GP FGC+LM DF LS R+K+N AYENY RI+V
Sbjct: 339 YSLLLKKEKAIVVQPDRITVANGPTFGCILMSDFFRELSKRVKRNETAYENYHRIFVPEG 398
Query: 389 XXXXXXXXXXXRVNVLFQHIQKMLSANSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGS 448
RVN +FQHIQKMLS+ +AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGS
Sbjct: 399 KPLKCESREPLRVNTMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGS 458
Query: 449 IGWSVGATLGYAKAAKDKRVIACIGDGSFQVTAQEVSTMLRWGQKSIIFLINNGGYTIEV 508
IGWSVGATLGYA+A+ +KRV+A IGDGSFQVT Q++STMLR GQK+IIFLINNGGYTIEV
Sbjct: 459 IGWSVGATLGYAQASPEKRVLAFIGDGSFQVTVQDISTMLRNGQKTIIFLINNGGYTIEV 518
Query: 509 EIHDGPYNVIKNWNYTGVVEAFHNGEGKCYTAKVRTXXXXXXXXXXAQGPKKDCLCFIEV 568
EIHDGPYNVIKNWNYTG+V+A HNGEG C+TAKVR A KKDCLCFIEV
Sbjct: 519 EIHDGPYNVIKNWNYTGLVDAIHNGEGNCWTAKVRYEEELVEAITTATTEKKDCLCFIEV 578
Query: 569 IVHKDDTSKELLEWGSRVSAANSRPPNPQ 597
I+HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct: 579 ILHKDDTSKELLEWGSRVSAANSRPPNPQ 607
>AT5G54960.1 | chr5:22310858-22312681 REVERSE LENGTH=608
Length = 607
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/569 (75%), Positives = 465/569 (81%), Gaps = 7/569 (1%)
Query: 29 TLGRHLARRLAEVGARDVFTVPGDFNLTXXXXXXXXXXXXXXXVRLVGCCNELNXXXXXX 88
TLGR+LARRL E+G DVF+VPGDFNLT ++L+GCCNELN
Sbjct: 46 TLGRYLARRLVEIGVTDVFSVPGDFNLTLLDHLIAEPN-----LKLIGCCNELNAGYAAD 100
Query: 89 XXXXXXXXXXXXXXXTFTVGGLSAINAVAGAFSENLPVVCIVGGPNSNDYGSNRILHHTI 148
TFTVGGLS +NA+AGA+SENLP++CIVGGPNSNDYG+NRILHHTI
Sbjct: 101 GYARSRGVGACVV--TFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTI 158
Query: 149 GLPDFTQELRCFQTVTCYQAVVNNLEDAHEQIDAAISTAIKESKPVYISISCNLPSIPHP 208
GLPDFTQELRCFQ VTC+QAV+NNLE+AHE ID AISTA+KESKPVYISISCNLP+IP P
Sbjct: 159 GLPDFTQELRCFQAVTCFQAVINNLEEAHELIDTAISTALKESKPVYISISCNLPAIPLP 218
Query: 209 TFSRHPVPFFLSPRLSNQMNLEAAVETAAAFLNKAVKPVLVGGPKMRVAKACKSFVELAD 268
TFSRHPVPF L ++SNQ+ L+AAVE AA FLNKAVKPVLVGGPKMRVAKA +FVELAD
Sbjct: 219 TFSRHPVPFMLPMKVSNQIGLDAAVEAAAEFLNKAVKPVLVGGPKMRVAKAADAFVELAD 278
Query: 269 ACGYPVAVMPSAKGLVPEHHPRFIGTYWGAVSTPFCAEIVESADAYLFAGPIFNDYSSVG 328
A GY +AVMPSAKG VPEHH FIGTYWGAVST FCAEIVESADAYLFAGPIFNDYSSVG
Sbjct: 279 ASGYGLAVMPSAKGQVPEHHKHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVG 338
Query: 329 YSLLLKKEKAIIVQPDRVVIGHGPAFGCVLMKDFLHALSARLKKNTAAYENYRRIYVXXX 388
YSLLLKKEKAIIVQPDRV IG+GPAFGCVLMKDFL L+ R+K N +YENY RIYV
Sbjct: 339 YSLLLKKEKAIIVQPDRVTIGNGPAFGCVLMKDFLSELAKRIKHNNTSYENYHRIYVPEG 398
Query: 389 XXXXXXXXXXXRVNVLFQHIQKMLSANSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGS 448
RVNVLFQHIQ MLS+ SAV+AETGDSWFNCQKLKLPEGCGYEFQMQYGS
Sbjct: 399 KPLRDNPNESLRVNVLFQHIQNMLSSESAVLAETGDSWFNCQKLKLPEGCGYEFQMQYGS 458
Query: 449 IGWSVGATLGYAKAAKDKRVIACIGDGSFQVTAQEVSTMLRWGQKSIIFLINNGGYTIEV 508
IGWSVGATLGYA+A ++RVIACIGDGSFQVTAQ+VSTM+R GQK+IIFLINNGGYTIEV
Sbjct: 459 IGWSVGATLGYAQAMPNRRVIACIGDGSFQVTAQDVSTMIRCGQKTIIFLINNGGYTIEV 518
Query: 509 EIHDGPYNVIKNWNYTGVVEAFHNGEGKCYTAKVRTXXXXXXXXXXAQGPKKDCLCFIEV 568
EIHDGPYNVIKNWNYT VEA HNGEGKC+TAKVR A +K+ CFIEV
Sbjct: 519 EIHDGPYNVIKNWNYTAFVEAIHNGEGKCWTAKVRCEEELVKAINTATNEEKESFCFIEV 578
Query: 569 IVHKDDTSKELLEWGSRVSAANSRPPNPQ 597
IVHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct: 579 IVHKDDTSKELLEWGSRVSAANSRPPNPQ 607
>AT5G01320.1 | chr5:129484-131625 REVERSE LENGTH=604
Length = 603
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/569 (72%), Positives = 462/569 (81%), Gaps = 7/569 (1%)
Query: 29 TLGRHLARRLAEVGARDVFTVPGDFNLTXXXXXXXXXXXXXXXVRLVGCCNELNXXXXXX 88
TLGRHL+RRL + G DVF+VPGDFNLT + +GCCNELN
Sbjct: 42 TLGRHLSRRLVQAGVTDVFSVPGDFNLTLLDHLIAEPE-----LNNIGCCNELNAGYAAD 96
Query: 89 XXXXXXXXXXXXXXXTFTVGGLSAINAVAGAFSENLPVVCIVGGPNSNDYGSNRILHHTI 148
TFTVGGLS +NA+AGA+SENLPV+CIVGGPNSND+G+NRILHHTI
Sbjct: 97 GYARSRGVGACVV--TFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTI 154
Query: 149 GLPDFTQELRCFQTVTCYQAVVNNLEDAHEQIDAAISTAIKESKPVYISISCNLPSIPHP 208
GLPDF+QELRCFQTVTCYQAVVNNLEDAHEQID AI+TA+KESKPVYISISCNL + PHP
Sbjct: 155 GLPDFSQELRCFQTVTCYQAVVNNLEDAHEQIDKAIATALKESKPVYISISCNLAATPHP 214
Query: 209 TFSRHPVPFFLSPRLSNQMNLEAAVETAAAFLNKAVKPVLVGGPKMRVAKACKSFVELAD 268
TF+R PVPF L+PR+SN M LEAAVE FLNKAVKPV+VGGPK+RVAKA ++F+ELAD
Sbjct: 215 TFARDPVPFDLTPRMSNTMGLEAAVEATLEFLNKAVKPVMVGGPKLRVAKASEAFLELAD 274
Query: 269 ACGYPVAVMPSAKGLVPEHHPRFIGTYWGAVSTPFCAEIVESADAYLFAGPIFNDYSSVG 328
A GYP+AVMPS KGLVPE+HP FIGTYWGAVSTPFC+EIVESADAY+FAGPIFNDYSSVG
Sbjct: 275 ASGYPLAVMPSTKGLVPENHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVG 334
Query: 329 YSLLLKKEKAIIVQPDRVVIGHGPAFGCVLMKDFLHALSARLKKNTAAYENYRRIYVXXX 388
YSLLLKKEKAIIV PDRVV+ +GP FGCVLM DF L+ R+K+N AYENY RI+V
Sbjct: 335 YSLLLKKEKAIIVHPDRVVVANGPTFGCVLMSDFFRELAKRVKRNETAYENYERIFVPEG 394
Query: 389 XXXXXXXXXXXRVNVLFQHIQKMLSANSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGS 448
RVN +FQHIQKMLS+ +AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGS
Sbjct: 395 KPLKCKPGEPLRVNAMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGS 454
Query: 449 IGWSVGATLGYAKAAKDKRVIACIGDGSFQVTAQEVSTMLRWGQKSIIFLINNGGYTIEV 508
IGWSVGATLGYA+A +KRV++ IGDGSFQVTAQ++STM+R GQK+IIFLINNGGYTIEV
Sbjct: 455 IGWSVGATLGYAQATPEKRVLSFIGDGSFQVTAQDISTMIRNGQKAIIFLINNGGYTIEV 514
Query: 509 EIHDGPYNVIKNWNYTGVVEAFHNGEGKCYTAKVRTXXXXXXXXXXAQGPKKDCLCFIEV 568
EIHDGPYNVIKNWNYTG+V+A HNGEGKC+T KVR A KKD LCFIEV
Sbjct: 515 EIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVRYEEELVEAIKTATTEKKDSLCFIEV 574
Query: 569 IVHKDDTSKELLEWGSRVSAANSRPPNPQ 597
IVHKDDTSKELLEWGSRVSAAN RPPNPQ
Sbjct: 575 IVHKDDTSKELLEWGSRVSAANGRPPNPQ 603
>AT5G01330.1 | chr5:132538-134807 REVERSE LENGTH=593
Length = 592
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/569 (71%), Positives = 457/569 (80%), Gaps = 7/569 (1%)
Query: 29 TLGRHLARRLAEVGARDVFTVPGDFNLTXXXXXXXXXXXXXXXVRLVGCCNELNXXXXXX 88
TLGRHL+RRL + G D+FTVPGDFNL+ + +GCCNELN
Sbjct: 31 TLGRHLSRRLVQAGVTDIFTVPGDFNLSLLDQLIANPE-----LNNIGCCNELNAGYAAD 85
Query: 89 XXXXXXXXXXXXXXXTFTVGGLSAINAVAGAFSENLPVVCIVGGPNSNDYGSNRILHHTI 148
TFTVGGLS +NA+AGA+SENLPV+CIVGGPNSND+G+NRILHHTI
Sbjct: 86 GYARSRGVGACVV--TFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTI 143
Query: 149 GLPDFTQELRCFQTVTCYQAVVNNLEDAHEQIDAAISTAIKESKPVYISISCNLPSIPHP 208
GLPDF+QELRCFQTVTCYQAVVN+LEDAHEQID AI+TA++ESKPVYISISCNL +IPHP
Sbjct: 144 GLPDFSQELRCFQTVTCYQAVVNHLEDAHEQIDKAIATALRESKPVYISISCNLAAIPHP 203
Query: 209 TFSRHPVPFFLSPRLSNQMNLEAAVETAAAFLNKAVKPVLVGGPKMRVAKACKSFVELAD 268
TF+ +PVPF L+PRLSN+ LEAAVE FLNKAVKPV+VGGPK+RVAKA +FVELAD
Sbjct: 204 TFASYPVPFDLTPRLSNKDCLEAAVEATLEFLNKAVKPVMVGGPKLRVAKARDAFVELAD 263
Query: 269 ACGYPVAVMPSAKGLVPEHHPRFIGTYWGAVSTPFCAEIVESADAYLFAGPIFNDYSSVG 328
A GYPVAVMPSAKG VPE+HP FIGTYWGAVST FC+EIVESADAY+FAGPIFNDYSSVG
Sbjct: 264 ASGYPVAVMPSAKGFVPENHPHFIGTYWGAVSTLFCSEIVESADAYIFAGPIFNDYSSVG 323
Query: 329 YSLLLKKEKAIIVQPDRVVIGHGPAFGCVLMKDFLHALSARLKKNTAAYENYRRIYVXXX 388
YSLLLKKEKAIIV PD VV+ +GP FGCV M +F L+ R+K N AYENY RI+V
Sbjct: 324 YSLLLKKEKAIIVHPDSVVVANGPTFGCVRMSEFFRELAKRVKPNKTAYENYHRIFVPEG 383
Query: 389 XXXXXXXXXXXRVNVLFQHIQKMLSANSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGS 448
R+N +FQHIQKMLS +AVIAETGDSWFNCQKLKLP+GCGYEFQMQYGS
Sbjct: 384 KPLKCKPREPLRINAMFQHIQKMLSNETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGS 443
Query: 449 IGWSVGATLGYAKAAKDKRVIACIGDGSFQVTAQEVSTMLRWGQKSIIFLINNGGYTIEV 508
IGWSVGATLGYA+A +KRV++ IGDGSFQVTAQ+VSTM+R GQK+IIFLINNGGYTIEV
Sbjct: 444 IGWSVGATLGYAQATPEKRVLSFIGDGSFQVTAQDVSTMIRNGQKTIIFLINNGGYTIEV 503
Query: 509 EIHDGPYNVIKNWNYTGVVEAFHNGEGKCYTAKVRTXXXXXXXXXXAQGPKKDCLCFIEV 568
EIHDGPYNVIKNWNYTG+V+A HNGEGKC+T KVR A KKD LCFIEV
Sbjct: 504 EIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVRYEEELVEAINTATLEKKDSLCFIEV 563
Query: 569 IVHKDDTSKELLEWGSRVSAANSRPPNPQ 597
IVHKDDTSKELLEWGSRVSAAN RPPNPQ
Sbjct: 564 IVHKDDTSKELLEWGSRVSAANGRPPNPQ 592
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,265,648
Number of extensions: 438592
Number of successful extensions: 935
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 928
Number of HSP's successfully gapped: 4
Length of query: 597
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 493
Effective length of database: 8,255,305
Effective search space: 4069865365
Effective search space used: 4069865365
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)