Os01g0141100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Salt-induced AAA-Type ATPase.
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Os01g0141100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Salt-induced AAA-Type ATPase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.78 | 0.204 | 11.5 | -0.431 | 0.3 | -0.285 | -0.123 | -0.0149 | -0.0258 | 4.95 | 14.84 | 10 | -- | -- |
| 18.75 | 0.202 | 11.5 | -0.435 | 0.298 | -0.288 | -0.114 | -- | -0.0277 | 4.98 | 14.92 | 9 | -- | -- |
| 18.79 | 0.202 | 11.5 | -0.437 | 0.302 | -0.285 | -- | -0.0136 | -0.0243 | 4.92 | 14.92 | 9 | -- | -- |
| 18.76 | 0.202 | 11.5 | -0.432 | 0.298 | -0.285 | -- | -- | -0.0285 | 4.9 | 15.21 | 9 | -- | -- |
| 22.98 | 0.223 | 11.5 | -0.409 | -- | -0.352 | -- | -0.0492 | -0.00909 | -- | 15.52 | 19 | -- | -- |
| 21.67 | 0.218 | 11.5 | -0.453 | 0.46 | -- | 0.0355 | -- | -0.0307 | 2.66 | -- | -- | -- | -- |
| 21.68 | 0.218 | 11.5 | -0.454 | 0.46 | -- | -- | -- | -0.0309 | 2.67 | -- | -- | -- | -- |
| 22.97 | 0.223 | 11.5 | -0.415 | -- | -0.35 | -- | -- | -0.0149 | -- | 15.21 | 19 | -- | -- |
| 23.69 | 0.227 | 11.5 | -- | 0.279 | -0.311 | -- | -- | 0.0117 | 5.05 | 16.48 | 19 | -- | -- |
| 34.03 | 0.273 | 11.5 | -0.434 | -- | -- | -- | -- | -0.0193 | -- | -- | -- | -- | -- |
| 27.1 | 0.244 | 11.5 | -- | 0.451 | -- | -- | -- | 0.0196 | 2.65 | -- | -- | -- | -- |
| 27.56 | 0.244 | 11.5 | -- | -- | -0.367 | -- | -- | 0.0322 | -- | 15.31 | 24 | -- | -- |
| 39 | 0.291 | 11.5 | -- | -- | -- | -- | -- | 0.0289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 6 |
| 3 | 16.48 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 4 | 16.49 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 19 | 16.82 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 24 | 16.85 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 26 | 16.87 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 6 |
| 29 | 16.89 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 14 | 18 |
| 30 | 16.90 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 33 | 16.93 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 16 |
| 37 | 16.97 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 44 | 17.00 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 17 |
| 58 | 17.04 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 60 | 17.05 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 63 | 17.07 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 68 | 17.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 17 |
| 70 | 17.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 17 |
| 76 | 17.13 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 88 | 17.16 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 94 | 17.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 96 | 17.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 104 | 17.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 105 | 17.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 107 | 17.22 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 17 |
| 108 | 17.23 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 110 | 17.23 | wind | 1.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 132 | 17.26 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 139 | 17.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 140 | 17.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 142 | 17.27 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 143 | 17.27 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 146 | 17.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 147 | 17.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 150 | 17.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 164 | 17.29 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 178 | 17.30 | radiation | 10.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 188 | 17.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 7 |
| 190 | 17.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 193 | 17.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 201 | 17.33 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 202 | 17.33 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 222 | 17.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 227 | 17.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 17 |
| 233 | 17.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 17 |
| 237 | 17.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 257 | 17.38 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 259 | 17.39 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 272 | 17.40 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 4 |
| 275 | 17.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 8 |
| 277 | 17.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 281 | 17.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 304 | 17.44 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 327 | 17.46 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 339 | 17.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 340 | 17.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 345 | 17.48 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 368 | 17.50 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 378 | 17.51 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 380 | 17.51 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 381 | 17.51 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 6 |
| 390 | 17.51 | radiation | 40.0 | 90 | < th | dose independent | rect. | 14 | 18 |
| 408 | 17.53 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 6 |
| 418 | 17.53 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 419 | 17.53 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 6 |
| 456 | 17.54 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 461 | 17.55 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 465 | 17.55 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 491 | 17.56 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 18 |
| 495 | 17.56 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 14 | 18 |
| 498 | 17.57 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 500 | 17.57 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 516 | 17.57 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 545 | 17.59 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 546 | 17.59 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 578 | 17.61 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 582 | 17.61 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 585 | 17.61 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 586 | 17.61 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 587 | 17.61 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 6 |
| 608 | 17.61 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 623 | 17.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 635 | 17.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 636 | 17.62 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 637 | 17.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 645 | 17.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 648 | 17.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 663 | 17.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 688 | 17.64 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 689 | 17.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 8 |
| 698 | 17.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 736 | 17.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 16 |
| 745 | 17.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 7 |
| 754 | 17.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 776 | 17.69 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 798 | 17.70 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 18 |
| 820 | 17.71 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 823 | 17.71 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 842 | 17.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 855 | 17.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 867 | 17.73 | wind | 1.0 | 90 | > th | dose dependent | rect. | 14 | 7 |
| 871 | 17.73 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 16 |
| 904 | 17.75 | humidity | 90.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 943 | 17.77 | radiation | 1.0 | 270 | > th | dose independent | sin | 4 | NA |
| 944 | 17.77 | radiation | 1.0 | 270 | < th | dose independent | sin | 4 | NA |
| 945 | 17.77 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 973 | 17.78 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 14 |