Os01g0127900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mannose-6-phosphate isomerase, type I family protein.
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Os01g0127900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mannose-6-phosphate isomerase, type I family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 230.86 | 0.714 | 6.94 | -1.18 | 2.83 | 3.72 | -0.773 | -3.14 | 0.0826 | 20.1 | 0.4323 | 726 | -- | -- |
| 239.21 | 0.72 | 6.97 | -1.29 | 2.93 | 3.8 | 0.664 | -- | 0.0318 | 20.1 | 0.432 | 740 | -- | -- |
| 231.77 | 0.709 | 6.94 | -1.16 | 2.95 | 3.89 | -- | -2.42 | 0.093 | 20 | 0.4397 | 726 | -- | -- |
| 240.56 | 0.722 | 6.97 | -1.23 | 3.11 | 4.08 | -- | -- | 0.0657 | 20 | 0.4399 | 744 | -- | -- |
| 264.29 | 0.757 | 6.8 | -0.783 | -- | 3.22 | -- | -1.84 | 0.353 | -- | 0.4993 | 1721 | -- | -- |
| 267.16 | 0.766 | 6.94 | -1.63 | 1.74 | -- | -1.23 | -- | -0.109 | 1.22 | -- | -- | -- | -- |
| 273.25 | 0.774 | 6.94 | -1.59 | 1.74 | -- | -- | -- | -0.101 | 1.12 | -- | -- | -- | -- |
| 263.41 | 0.756 | 6.84 | -1.03 | -- | 3.44 | -- | -- | 0.229 | -- | 0.43 | 1709 | -- | -- |
| 279.32 | 0.778 | 6.92 | -- | 3.26 | 4.39 | -- | -- | 0.19 | 19.9 | 0.33 | 755 | -- | -- |
| 460 | 1 | 6.91 | -1.52 | -- | -- | -- | -- | -0.0668 | -- | -- | -- | -- | -- |
| 339.94 | 0.862 | 6.9 | -- | 1.71 | -- | -- | -- | 0.0759 | 1.08 | -- | -- | -- | -- |
| 289.26 | 0.792 | 6.81 | -- | -- | 3.64 | -- | -- | 0.367 | -- | 0.46 | 1697 | -- | -- |
| 521.31 | 1.07 | 6.87 | -- | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 220.93 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 2 | 221.38 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 4 | 221.55 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 5 | 221.69 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 8 | 222.25 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 11 |
| 9 | 222.26 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 10 | 222.26 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 8 |
| 27 | 222.99 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 29 | 223.06 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 41 | 223.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 46 | 223.30 | humidity | 60.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 47 | 223.33 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 50 | 223.53 | humidity | 60.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 75 | 223.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 85 | 223.91 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 114 | 224.66 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 116 | 224.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 117 | 224.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 127 | 224.87 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 128 | 224.94 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 141 | 224.98 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 151 | 224.99 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 7 |
| 216 | 225.61 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 273 | 226.18 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 21 | 8 |
| 299 | 226.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 354 | 226.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 367 | 226.88 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 419 | 227.27 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 422 | 227.33 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 441 | 227.37 | humidity | 70.0 | 14400 | < th | dose dependent | no | NA | NA |
| 442 | 227.37 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 7 | 15 |
| 558 | 227.58 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 559 | 227.58 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 15 |
| 613 | 227.59 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 686 | 227.68 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 722 | 227.85 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 23 |
| 741 | 227.90 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 927 | 228.27 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 16 |
| 947 | 228.28 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |
| 948 | 228.28 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 971 | 228.28 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 22 | 23 |
| 975 | 228.29 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 993 | 228.29 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 21 |