Os01g0120900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0120900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.26 | 0.48 | 3.17 | -0.205 | 0.0674 | -0.342 | -0.0963 | 1.92 | -0.0149 | 12.7 | 1.024 | 11 | -- | -- |
| 107.56 | 0.487 | 3.16 | -0.134 | 0.0631 | -0.188 | 0.0634 | -- | 0.00423 | 12.4 | 1.024 | 11 | -- | -- |
| 104.02 | 0.479 | 3.17 | -0.222 | 0.07 | -0.326 | -- | 1.79 | -0.0147 | 12.7 | 1.054 | 11 | -- | -- |
| 107.55 | 0.483 | 3.16 | -0.136 | 0.0643 | -0.215 | -- | -- | 0.00408 | 11.9 | 1.01 | 12 | -- | -- |
| 104.31 | 0.478 | 3.17 | -0.221 | -- | -0.304 | -- | 1.78 | -0.0159 | -- | 1.056 | 11 | -- | -- |
| 108.51 | 0.488 | 3.16 | -0.109 | 0.0655 | -- | -0.206 | -- | 0.000176 | 7.1 | -- | -- | -- | -- |
| 108.6 | 0.488 | 3.16 | -0.112 | 0.0671 | -- | -- | -- | 0.00106 | 8.28 | -- | -- | -- | -- |
| 107.8 | 0.484 | 3.16 | -0.135 | -- | -0.197 | -- | -- | 0.00312 | -- | 1.003 | 12 | -- | -- |
| 108.02 | 0.487 | 3.15 | -- | 0.0634 | -0.169 | -- | -- | 0.0185 | 11.5 | 1.094 | 12 | -- | -- |
| 108.84 | 0.487 | 3.16 | -0.111 | -- | -- | -- | -- | 0.0018 | -- | -- | -- | -- | -- |
| 108.93 | 0.488 | 3.15 | -- | 0.0665 | -- | -- | -- | 0.0135 | 8.41 | -- | -- | -- | -- |
| 108.26 | 0.486 | 3.15 | -- | -- | -0.157 | -- | -- | 0.0177 | -- | 1.036 | 12 | -- | -- |
| 109.17 | 0.488 | 3.15 | -- | -- | -- | -- | -- | 0.0142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.23 | wind | 1.0 | 30 | < th | dose dependent | rect. | 1 | 2 |
| 2 | 96.24 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 3 |
| 25 | 98.88 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 31 | 99.07 | wind | 1.0 | 30 | < th | dose dependent | rect. | 17 | 10 |
| 77 | 100.80 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 2 |
| 80 | 101.00 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 23 |
| 81 | 101.00 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 85 | 101.11 | wind | 1.0 | 10 | < th | dose independent | sin | 17 | NA |
| 91 | 101.17 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 94 | 101.23 | wind | 1.0 | 10 | > th | dose independent | sin | 17 | NA |
| 97 | 101.27 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 111 | 101.36 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 119 | 101.43 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 1 | 2 |
| 121 | 101.44 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 125 | 101.46 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 129 | 101.51 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 132 | 101.53 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 134 | 101.55 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 137 | 101.55 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 141 | 101.55 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 143 | 101.55 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 148 | 101.55 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 149 | 101.55 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 152 | 101.55 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 157 | 101.55 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 158 | 101.56 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 159 | 101.56 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 162 | 101.60 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 213 | 101.71 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 244 | 101.85 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 245 | 101.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 248 | 101.85 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 252 | 101.85 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 261 | 101.85 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 262 | 101.85 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 282 | 101.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 285 | 101.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 311 | 102.07 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 340 | 102.15 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 343 | 102.15 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 348 | 102.16 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 350 | 102.17 | wind | 9.0 | 30 | > th | dose dependent | rect. | 18 | 8 |
| 369 | 102.20 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 4 |
| 383 | 102.21 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 390 | 102.24 | wind | 9.0 | 90 | > th | dose dependent | rect. | 18 | 5 |
| 421 | 102.52 | wind | 7.0 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 422 | 102.52 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 454 | 102.82 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 467 | 102.98 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 22 |
| 636 | 103.25 | radiation | 10.0 | 720 | < th | dose independent | rect. | 21 | 9 |
| 638 | 103.25 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 692 | 103.39 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 709 | 103.42 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 10 |
| 728 | 103.46 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 737 | 103.52 | radiation | 10.0 | 720 | < th | dose independent | rect. | 3 | 3 |
| 738 | 103.52 | wind | 9.0 | 720 | < th | dose independent | rect. | 15 | 12 |
| 771 | 103.70 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 18 |
| 772 | 103.70 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 18 |
| 775 | 103.71 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 13 |
| 776 | 103.71 | wind | 1.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 812 | 103.83 | humidity | 60.0 | 270 | > th | dose independent | rect. | 11 | 12 |
| 858 | 103.94 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 905 | 103.97 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 12 |
| 918 | 103.97 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 12 |
| 921 | 103.98 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 12 |
| 979 | 104.07 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 21 | 9 |
| 982 | 104.08 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 7 |
| 985 | 104.08 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 7 |