Os01g0118300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidyl serine synthase family protein.
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Os01g0118300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidyl serine synthase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 380.2 | 0.916 | 5.18 | -3.15 | 1.69 | -8.82 | 2.31 | 15.2 | -0.652 | 1.65 | 0.2688 | 93 | -- | -- |
| 382.95 | 0.911 | 5.15 | -3.12 | 1.69 | -4.65 | 2.48 | -- | -0.689 | 1.79 | 1.132e-05 | 98 | -- | -- |
| 399.36 | 0.931 | 5.19 | -3.3 | 1.67 | -8.34 | -- | 12.8 | -0.661 | 1.62 | 5.177e-05 | 141 | -- | -- |
| 400.18 | 0.932 | 5.14 | -3.18 | 1.65 | -4.45 | -- | -- | -0.65 | 1.71 | 4.99e-06 | 148 | -- | -- |
| 569.62 | 1.11 | 5.17 | -3.19 | -- | -7.94 | -- | 10.5 | -0.609 | -- | 0.4554 | 141 | -- | -- |
| 423.1 | 0.964 | 5.16 | -2.9 | 1.69 | -- | 2.38 | -- | -0.694 | 1.42 | -- | -- | -- | -- |
| 445.84 | 0.989 | 5.16 | -2.98 | 1.7 | -- | -- | -- | -0.708 | 1.55 | -- | -- | -- | -- |
| 565.56 | 1.11 | 5.13 | -3.2 | -- | -3.94 | -- | -- | -0.612 | -- | 0.000748 | 297 | -- | -- |
| 658.77 | 1.2 | 5.08 | -- | 1.64 | -3.23 | -- | -- | -0.341 | 1.63 | 0.1501 | 86 | -- | -- |
| 622.02 | 1.17 | 5.14 | -2.91 | -- | -- | -- | -- | -0.671 | -- | -- | -- | -- | -- |
| 679.47 | 1.22 | 5.09 | -- | 1.64 | -- | -- | -- | -0.376 | 1.49 | -- | -- | -- | -- |
| 822.24 | 1.34 | 5.06 | -- | -- | -3.39 | -- | -- | -0.309 | -- | 0.3624 | 86 | -- | -- |
| 845.3 | 1.36 | 5.07 | -- | -- | -- | -- | -- | -0.348 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 370.40 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 20 |
| 2 | 371.46 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 22 |
| 6 | 374.22 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 11 |
| 8 | 374.47 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 14 | 5 |
| 9 | 374.63 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 5 |
| 10 | 374.75 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 14 | 375.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 1 |
| 20 | 375.99 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 20 |
| 32 | 377.34 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 11 |
| 36 | 377.54 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 16 |
| 40 | 377.74 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 20 |
| 41 | 377.80 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 6 | 13 |
| 44 | 377.87 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 23 |
| 50 | 378.09 | precipitation | 0.1 | 90 | < th | dose independent | sin | 23 | NA |
| 52 | 378.09 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 23 | NA |
| 53 | 378.10 | precipitation | 0.1 | 90 | > th | dose independent | sin | 23 | NA |
| 57 | 378.20 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 19 |
| 69 | 378.27 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 1 |
| 112 | 379.14 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 15 |
| 113 | 379.18 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 22 |
| 129 | 379.42 | temperature | 25.0 | 90 | > th | dose independent | rect. | 10 | 23 |
| 137 | 379.59 | humidity | 90.0 | 270 | > th | dose independent | rect. | 16 | 2 |
| 142 | 379.63 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 22 |
| 169 | 380.10 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 172 | 380.15 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 174 | 380.17 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 179 | 380.21 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 6 |
| 181 | 380.22 | precipitation | 0.1 | 90 | > th | dose independent | no | NA | NA |
| 182 | 380.22 | precipitation | 0.1 | 90 | < th | dose independent | no | NA | NA |
| 190 | 380.22 | precipitation | 0.1 | 90 | < th | dose dependent | no | NA | NA |
| 191 | 380.23 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 23 |
| 202 | 380.36 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 23 |
| 211 | 380.50 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 221 | 380.59 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 23 |
| 242 | 380.82 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 265 | 381.02 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 287 | 381.26 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 10 |
| 292 | 381.33 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 3 |
| 294 | 381.34 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 13 | 9 |
| 300 | 381.37 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 314 | 381.46 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 330 | 381.56 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 8 |
| 337 | 381.61 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 349 | 381.70 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 0 | NA |
| 378 | 381.92 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 11 |
| 409 | 382.15 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 416 | 382.21 | temperature | 25.0 | 90 | > th | dose independent | rect. | 13 | 23 |
| 425 | 382.24 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 431 | 382.30 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 16 |
| 437 | 382.33 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 445 | 382.35 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 21 | 21 |
| 469 | 382.46 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 16 |
| 492 | 382.56 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 17 |
| 499 | 382.66 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 23 |
| 501 | 382.67 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 511 | 382.74 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 540 | 382.92 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 22 |
| 611 | 383.22 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 612 | 383.22 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 22 |
| 620 | 383.24 | temperature | 25.0 | 90 | > th | dose independent | no | NA | NA |
| 642 | 383.37 | temperature | 25.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 666 | 383.46 | precipitation | 0.1 | 90 | > th | dose dependent | no | NA | NA |
| 667 | 383.46 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 676 | 383.47 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 682 | 383.50 | temperature | 25.0 | 90 | > th | dose independent | rect. | 18 | 23 |
| 697 | 383.54 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 709 | 383.57 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 712 | 383.59 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 727 | 383.66 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 730 | 383.69 | temperature | 25.0 | 90 | < th | dose independent | no | NA | NA |
| 738 | 383.70 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 764 | 383.86 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 813 | 384.05 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 824 | 384.08 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 833 | 384.11 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 885 | 384.27 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 903 | 384.35 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 913 | 384.40 | temperature | 25.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 932 | 384.49 | precipitation | 0.1 | 270 | < th | dose independent | sin | 13 | NA |
| 935 | 384.49 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 13 | NA |
| 951 | 384.58 | humidity | 90.0 | 90 | > th | dose independent | rect. | 16 | 5 |
| 965 | 384.61 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 966 | 384.62 | radiation | 1.0 | 720 | < th | dose independent | rect. | 3 | 15 |
| 983 | 384.69 | temperature | 20.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 987 | 384.70 | temperature | 20.0 | 14400 | > th | dose independent | sin | 19 | NA |