BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0118300 Os01g0118300|AK065788
         (254 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0118300  Phosphatidyl serine synthase family protein         481   e-136
Os05g0554400  Phosphatidyl serine synthase family protein         407   e-114
Os01g0683500  Similar to Phosphatidylserine synthase 2 (EC 2...    68   5e-12

>Os01g0118300 Phosphatidyl serine synthase family protein
          Length = 254

 Score =  481 bits (1239), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 240/254 (94%), Positives = 240/254 (94%)

Query: 1   EILFDEFVIAHILGWWGKAIMIRNQPLLWVLSIGFELMELTFRHMLPNFNECWWDSIVLD 60
           EILFDEFVIAHILGWWGKAIMIRNQPLLWVLSIGFELMELTFRHMLPNFNECWWDSIVLD
Sbjct: 1   EILFDEFVIAHILGWWGKAIMIRNQPLLWVLSIGFELMELTFRHMLPNFNECWWDSIVLD 60

Query: 61  ILICNWFGIWAGMKTVRYFDGRTYEWVGLSRQPNIISKVKRTLGQFTPAQWDKDEWYPLL 120
           ILICNWFGIWAGMKTVRYFDGRTYEWVGLSRQPNIISKVKRTLGQFTPAQWDKDEWYPLL
Sbjct: 61  ILICNWFGIWAGMKTVRYFDGRTYEWVGLSRQPNIISKVKRTLGQFTPAQWDKDEWYPLL 120

Query: 121 GPWRFIQVLSLCIVFMIVELNTFFLKFCLWIPPRNPLIVYRLVLWWLIAIPTIREYNTYL 180
           GPWRFIQVLSLCIVFMIVELNTFFLKFCLWIPPRNPLIVYRLVLWWLIAIPTIREYNTYL
Sbjct: 121 GPWRFIQVLSLCIVFMIVELNTFFLKFCLWIPPRNPLIVYRLVLWWLIAIPTIREYNTYL 180

Query: 181 QDRKPVKKVGSFCWXXXXXXXXXXXXXXKFGHGLFPKSMPSWLFIAWTTVASLLMMFLLV 240
           QDRKPVKKVGSFCW              KFGHGLFPKSMPSWLFIAWTTVASLLMMFLLV
Sbjct: 181 QDRKPVKKVGSFCWLSLAICILELLLCIKFGHGLFPKSMPSWLFIAWTTVASLLMMFLLV 240

Query: 241 WTWKIYRTMIRKRL 254
           WTWKIYRTMIRKRL
Sbjct: 241 WTWKIYRTMIRKRL 254



>Os05g0554400 Phosphatidyl serine synthase family protein
          Length = 422

 Score =  407 bits (1046), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 191/252 (75%), Positives = 215/252 (85%)

Query: 3   LFDEFVIAHILGWWGKAIMIRNQPLLWVLSIGFELMELTFRHMLPNFNECWWDSIVLDIL 62
           LFDEFV+AHILGWWGKA+MIRNQ LLWVLSIGFELMELTFRHMLPNFNECWWDSI+LDIL
Sbjct: 171 LFDEFVVAHILGWWGKAVMIRNQLLLWVLSIGFELMELTFRHMLPNFNECWWDSIILDIL 230

Query: 63  ICNWFGIWAGMKTVRYFDGRTYEWVGLSRQPNIISKVKRTLGQFTPAQWDKDEWYPLLGP 122
           ICNWFGIWAGM TVRYFDG+TYEWVGLSRQP+I+ KVKR+L QFTPAQWDKD+WYP +GP
Sbjct: 231 ICNWFGIWAGMHTVRYFDGKTYEWVGLSRQPSIMGKVKRSLSQFTPAQWDKDQWYPFMGP 290

Query: 123 WRFIQVLSLCIVFMIVELNTFFLKFCLWIPPRNPLIVYRLVLWWLIAIPTIREYNTYLQD 182
            RF+QVL LC+VFM VELNTFFLKFCLWIPPRNPL+VYRL+LWWLIAIPTIREYN+YLQ+
Sbjct: 291 LRFVQVLFLCVVFMTVELNTFFLKFCLWIPPRNPLVVYRLILWWLIAIPTIREYNSYLQN 350

Query: 183 RKPVKKVGSFCWXXXXXXXXXXXXXXKFGHGLFPKSMPSWLFIAWTTVASLLMMFLLVWT 242
            KPVKKVG+FCW              KFGHGLF   MP+WL I W++V   L++FLL W+
Sbjct: 351 SKPVKKVGAFCWLSLAICIVELLICMKFGHGLFHDPMPTWLIIFWSSVGVALVVFLLAWS 410

Query: 243 WKIYRTMIRKRL 254
           W+ +    RKRL
Sbjct: 411 WRNHLKYQRKRL 422



>Os01g0683500 Similar to Phosphatidylserine synthase 2 (EC 2.7.8.-) (PtdSer
          synthase-2) (PSS-2) (Serine-exchange enzyme II)
          Length = 42

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 32/32 (100%)

Query: 37 LMELTFRHMLPNFNECWWDSIVLDILICNWFG 68
          L++LTFRHMLPNFNECWWDSI+LDI+ICNWFG
Sbjct: 2  LLQLTFRHMLPNFNECWWDSIILDIMICNWFG 33



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.332    0.146    0.535 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,629,783
Number of extensions: 329218
Number of successful extensions: 663
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 663
Number of HSP's successfully gapped: 3
Length of query: 254
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 155
Effective length of database: 11,866,615
Effective search space: 1839325325
Effective search space used: 1839325325
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 155 (64.3 bits)