Os01g0106600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chitin-binding lectin 1 precursor (PL-I).
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Os01g0106600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chitin-binding lectin 1 precursor (PL-I).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.96 | 0.506 | 8.79 | 4 | 0.559 | -2.73 | -1.24 | 4.42 | 1.03 | 7.93 | 20.39 | 247 | -- | -- |
| 131.33 | 0.534 | 8.86 | 3.43 | 0.724 | -2.58 | -1.37 | -- | 0.946 | 6.99 | 17.18 | 252 | -- | -- |
| 119.87 | 0.51 | 8.78 | 4.03 | 0.555 | -2.66 | -- | 4.83 | 1.04 | 7.21 | 20.33 | 269 | -- | -- |
| 135.11 | 0.541 | 8.88 | 3.22 | 0.664 | -3 | -- | -- | 0.789 | 7.11 | 14.04 | 252 | -- | -- |
| 129.89 | 0.531 | 8.76 | 4.31 | -- | -3.04 | -- | 5.67 | 1.17 | -- | 20.61 | 339 | -- | -- |
| 226.02 | 0.705 | 8.97 | 2.58 | 1.46 | -- | -1.09 | -- | 0.365 | 5.73 | -- | -- | -- | -- |
| 228.88 | 0.708 | 8.97 | 2.57 | 1.45 | -- | -- | -- | 0.369 | 5.65 | -- | -- | -- | -- |
| 150.47 | 0.571 | 8.88 | 3.34 | -- | -3.33 | -- | -- | 0.878 | -- | 15.43 | 338 | -- | -- |
| 378.53 | 0.906 | 9 | -- | 1.1 | -1.43 | -- | -- | 0.257 | 5.84 | -20.91 | 281 | -- | -- |
| 337.98 | 0.859 | 8.99 | 2.62 | -- | -- | -- | -- | 0.404 | -- | -- | -- | -- | -- |
| 402.8 | 0.939 | 9.03 | -- | 1.49 | -- | -- | -- | 0.0831 | 5.58 | -- | -- | -- | -- |
| 406.59 | 0.939 | 9.01 | -- | -- | -1.96 | -- | -- | 0.314 | -- | 23.44 | 269 | -- | -- |
| 518.39 | 1.06 | 9.05 | -- | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.95 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 8 | 113.36 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 22 | 115.89 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 26 | 116.15 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 30 | 116.47 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 50 | 118.03 | temperature | 20 | 270 | > th | dose dependent | sin | 2 | NA |
| 57 | 118.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 70 | 118.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 75 | 119.11 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 77 | 119.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 19 |
| 87 | 119.64 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 156 | 121.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 167 | 121.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 15 |
| 171 | 121.37 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 200 | 121.66 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 301 | 122.32 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 311 | 122.32 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 17 |
| 351 | 122.58 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 412 | 123.02 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 416 | 123.05 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 474 | 123.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 481 | 123.56 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 487 | 123.60 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 488 | 123.60 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 490 | 123.60 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 536 | 123.81 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 550 | 123.90 | radiation | 30 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 551 | 123.90 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 564 | 123.97 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 599 | 124.07 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 615 | 124.18 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 626 | 124.25 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 641 | 124.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 661 | 124.42 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 689 | 124.53 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 697 | 124.57 | radiation | 1 | 14400 | < th | dose dependent | sin | 13 | NA |
| 718 | 124.64 | radiation | 30 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 755 | 124.71 | radiation | 1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 818 | 124.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 895 | 125.05 | radiation | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 977 | 125.24 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 16 |
| 1000 | 125.28 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 13 |