Os01g0105800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Iron sulfur assembly protein 1.
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Os01g0105800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Iron sulfur assembly protein 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.4 | 0.38 | 11.1 | -0.798 | 0.452 | 1.95 | 0.346 | -1.95 | -0.575 | 13.1 | 23.2 | 9 | -- | -- |
| 67.22 | 0.382 | 11.1 | -0.494 | 0.482 | 1.79 | -0.0366 | -- | -0.481 | 13.3 | 23.15 | 6 | -- | -- |
| 65.56 | 0.377 | 11.1 | -0.724 | 0.453 | 1.92 | -- | -1.48 | -0.555 | 13.4 | 23.16 | 4 | -- | -- |
| 67.01 | 0.381 | 11.1 | -0.502 | 0.491 | 1.79 | -- | -- | -0.5 | 13.4 | 23.02 | 3 | -- | -- |
| 74 | 0.401 | 11.1 | -0.866 | -- | 2.34 | -- | -1.92 | -0.634 | -- | 23.21 | 3 | -- | -- |
| 117.04 | 0.507 | 11 | -0.173 | 1.17 | -- | 0.268 | -- | -0.225 | 14.2 | -- | -- | -- | -- |
| 117.31 | 0.507 | 11 | -0.165 | 1.17 | -- | -- | -- | -0.223 | 14.2 | -- | -- | -- | -- |
| 76.51 | 0.407 | 11.1 | -0.584 | -- | 2.21 | -- | -- | -0.553 | -- | 23.1 | 3 | -- | -- |
| 73.11 | 0.398 | 11.1 | -- | 0.523 | 1.64 | -- | -- | -0.416 | 13.5 | 23.2 | 3 | -- | -- |
| 199.14 | 0.659 | 11 | -0.214 | -- | -- | -- | -- | -0.251 | -- | -- | -- | -- | -- |
| 118.03 | 0.508 | 11 | -- | 1.17 | -- | -- | -- | -0.205 | 14.2 | -- | -- | -- | -- |
| 85.28 | 0.43 | 11.1 | -- | -- | 2.11 | -- | -- | -0.465 | -- | 23.39 | 3 | -- | -- |
| 200.35 | 0.661 | 11 | -- | -- | -- | -- | -- | -0.227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.50 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 16 |
| 2 | 60.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 10 | 62.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 55 | 66.22 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 63 | 66.54 | temperature | 15 | 30 | > th | dose dependent | sin | 1 | NA |
| 98 | 67.61 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 134 | 68.35 | temperature | 30 | 30 | < th | dose dependent | sin | 1 | NA |
| 145 | 68.57 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 156 | 68.71 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 175 | 69.03 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 223 | 69.53 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 281 | 70.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 363 | 71.17 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 421 | 71.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 459 | 72.30 | temperature | 25 | 90 | > th | dose dependent | sin | 8 | NA |
| 557 | 73.21 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 559 | 73.23 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 588 | 73.61 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 621 | 73.92 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 632 | 74.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 640 | 74.08 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 656 | 74.39 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 690 | 74.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 706 | 74.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 708 | 74.91 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 730 | 75.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 732 | 75.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 748 | 75.35 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 752 | 75.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 768 | 75.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 781 | 75.63 | temperature | 15 | 720 | > th | dose dependent | sin | 3 | NA |
| 786 | 75.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 821 | 76.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 15 |
| 830 | 76.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 858 | 76.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 944 | 76.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 949 | 76.99 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 7 |