Os01g0104400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ricin B-related lectin domain containing protein.
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Os01g0104400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ricin B-related lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.25 | 0.245 | 13.8 | -0.957 | 0.509 | 0.812 | 0.0268 | -1.43 | 0.00389 | 16.4 | 24.43 | 1304 | -- | -- |
| 28.09 | 0.247 | 13.8 | -0.583 | 0.501 | 0.683 | 0.109 | -- | 0.0882 | 16.2 | 23.94 | 1271 | -- | -- |
| 27.2 | 0.243 | 13.8 | -0.957 | 0.514 | 0.826 | -- | -1.43 | -0.0076 | 16.3 | 24.1 | 1263 | -- | -- |
| 28.08 | 0.247 | 13.8 | -0.577 | 0.508 | 0.673 | -- | -- | 0.0931 | 16.4 | 23.99 | 1309 | -- | -- |
| 31.57 | 0.262 | 13.8 | -0.721 | -- | 0.96 | -- | -0.825 | -0.00212 | -- | 21.29 | 391 | -- | -- |
| 44.06 | 0.311 | 13.8 | -0.352 | 0.431 | -- | -0.161 | -- | 0.203 | 17.1 | -- | -- | -- | -- |
| 44.12 | 0.311 | 13.8 | -0.352 | 0.429 | -- | -- | -- | 0.202 | 17 | -- | -- | -- | -- |
| 32.02 | 0.264 | 13.8 | -0.563 | -- | 0.911 | -- | -- | 0.039 | -- | 21.09 | 375 | -- | -- |
| 36.08 | 0.28 | 13.8 | -- | 0.509 | 0.559 | -- | -- | 0.169 | 16.4 | 24.5 | 1271 | -- | -- |
| 53.83 | 0.343 | 13.8 | -0.368 | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
| 47.39 | 0.322 | 13.8 | -- | 0.436 | -- | -- | -- | 0.241 | 16.9 | -- | -- | -- | -- |
| 39.87 | 0.294 | 13.8 | -- | -- | 0.788 | -- | -- | 0.123 | -- | 21.43 | 363 | -- | -- |
| 57.39 | 0.354 | 13.8 | -- | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 86 | 27.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 15 |
| 142 | 27.40 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 174 | 27.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 18 |
| 342 | 27.81 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 376 | 27.85 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 420 | 27.97 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 608 | 28.49 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 635 | 28.56 | radiation | 1 | 1440 | > th | dose independent | sin | 16 | NA |
| 645 | 28.57 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 646 | 28.58 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 657 | 28.58 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 658 | 28.58 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 664 | 28.59 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 667 | 28.59 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 730 | 28.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 761 | 28.71 | radiation | 10 | 1440 | < th | dose dependent | sin | 16 | NA |
| 766 | 28.72 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 768 | 28.73 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 785 | 28.73 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 788 | 28.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 823 | 28.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 833 | 28.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 873 | 28.81 | radiation | 1 | 1440 | < th | dose independent | sin | 16 | NA |
| 917 | 28.86 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 19 |
| 923 | 28.87 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 933 | 28.88 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 949 | 28.89 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 15 |
| 957 | 28.89 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 13 |
| 969 | 28.90 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 11 |