BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0564600 Os12g0564600|AK101383
         (1159 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0564600  Protein of unknown function DUF814 domain cont...  2174   0.0  
AK059209                                                          426   e-119

>Os12g0564600 Protein of unknown function DUF814 domain containing protein
          Length = 1159

 Score = 2174 bits (5633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1063/1142 (93%), Positives = 1063/1142 (93%)

Query: 1    MVKARMTTADVAAEVKCLRRLIGMRLSNVYGITPKTYLFKLMNSSGITESGESEKVLLLM 60
            MVKARMTTADVAAEVKCLRRLIGMRLSNVYGITPKTYLFKLMNSSGITESGESEKVLLLM
Sbjct: 1    MVKARMTTADVAAEVKCLRRLIGMRLSNVYGITPKTYLFKLMNSSGITESGESEKVLLLM 60

Query: 61   ESGVRLHTTQYVRDKSTTPSGFTLKLRKHIRSKRLEDVRMLGYDRIILFQFGLGSNAHFV 120
            ESGVRLHTTQYVRDKSTTPSGFTLKLRKHIRSKRLEDVRMLGYDRIILFQFGLGSNAHFV
Sbjct: 61   ESGVRLHTTQYVRDKSTTPSGFTLKLRKHIRSKRLEDVRMLGYDRIILFQFGLGSNAHFV 120

Query: 121  ILELYAQGNILLTDSEYTVLTLLRSHRDDNKGLAIMSRHRYPVEACRVFERTDFTKLKDT 180
            ILELYAQGNILLTDSEYTVLTLLRSHRDDNKGLAIMSRHRYPVEACRVFERTDFTKLKDT
Sbjct: 121  ILELYAQGNILLTDSEYTVLTLLRSHRDDNKGLAIMSRHRYPVEACRVFERTDFTKLKDT 180

Query: 181  LMMNAVDDKESSQVTPGSIDAQEPSVTPSDGVPVTDKSEEPSTTTGXXXXXXXXXXXXXX 240
            LMMNAVDDKESSQVTPGSIDAQEPSVTPSDGVPVTDKSEEPSTTTG              
Sbjct: 181  LMMNAVDDKESSQVTPGSIDAQEPSVTPSDGVPVTDKSEEPSTTTGKKSASKNKQSSSNA 240

Query: 241  XXXXXXXXXXXTLKTLLGEALAYGPALAEHIILDAGLLPSTKVGKDPESSIDDHTIQSLV 300
                       TLKTLLGEALAYGPALAEHIILDAGLLPSTKVGKDPESSIDDHTIQSLV
Sbjct: 241  KASNNAPSNKSTLKTLLGEALAYGPALAEHIILDAGLLPSTKVGKDPESSIDDHTIQSLV 300

Query: 301  ESISKFEDWLVDVMSGQRIPEGYILMQNKAAAKKNLTPLEGSSASQKIYDEYCPVLLNQF 360
            ESISKFEDWLVDVMSGQRIPEGYILMQNKAAAKKNLTPLEGSSASQKIYDEYCPVLLNQF
Sbjct: 301  ESISKFEDWLVDVMSGQRIPEGYILMQNKAAAKKNLTPLEGSSASQKIYDEYCPVLLNQF 360

Query: 361  KSREFNEFETFDAALDEFYSKIESQRVNQQQKSKEDSAAQRLNKIKLDQENRVHTLRKEV 420
            KSREFNEFETFDAALDEFYSKIESQRVNQQQKSKEDSAAQRLNKIKLDQENRVHTLRKEV
Sbjct: 361  KSREFNEFETFDAALDEFYSKIESQRVNQQQKSKEDSAAQRLNKIKLDQENRVHTLRKEV 420

Query: 421  DHSIKMAELIEYNLEDVDAAIVAVRVSLANGMSWDALARMIKEEKKAGNPVAGLIDKLSF 480
            DHSIKMAELIEYNLEDVDAAIVAVRVSLANGMSWDALARMIKEEKKAGNPVAGLIDKLSF
Sbjct: 421  DHSIKMAELIEYNLEDVDAAIVAVRVSLANGMSWDALARMIKEEKKAGNPVAGLIDKLSF 480

Query: 481  ERNCITLLLSNNLDDMDEEEKTAPVEKVEVDLSLSAHANARRWYELXXXXXXXXXXTVTX 540
            ERNCITLLLSNNLDDMDEEEKTAPVEKVEVDLSLSAHANARRWYEL          TVT 
Sbjct: 481  ERNCITLLLSNNLDDMDEEEKTAPVEKVEVDLSLSAHANARRWYELKKKQESKQEKTVTA 540

Query: 541  XXXXXXXXXXXTRLQLAQEKTVAAITHMRKVHWFEKFNWFISSENYLIISGRDAQQNELI 600
                       TRLQLAQEKTVAAITHMRKVHWFEKFNWFISSENYLIISGRDAQQNELI
Sbjct: 541  HEKAFKAAEKKTRLQLAQEKTVAAITHMRKVHWFEKFNWFISSENYLIISGRDAQQNELI 600

Query: 601  VKRYMSKGDLYVHAELHGASSTIIKNHKPDNPIPPLTLNQAGSFTVCHSKAWDSKIVTSA 660
            VKRYMSKGDLYVHAELHGASSTIIKNHKPDNPIPPLTLNQAGSFTVCHSKAWDSKIVTSA
Sbjct: 601  VKRYMSKGDLYVHAELHGASSTIIKNHKPDNPIPPLTLNQAGSFTVCHSKAWDSKIVTSA 660

Query: 661  WWVYPYQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLVMGFGILFRLDESSLASHLNERR 720
            WWVYPYQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLVMGFGILFRLDESSLASHLNERR
Sbjct: 661  WWVYPYQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLVMGFGILFRLDESSLASHLNERR 720

Query: 721  VRGEDEEALPDVESQKLESNAELDGELDSDSETGKEKHDDESSLDNINVKKIDNPIPSNA 780
            VRGEDEEALPDVESQKLESNAELDGELDSDSETGKEKHDDESSLDNINVKKIDNPIPSNA
Sbjct: 721  VRGEDEEALPDVESQKLESNAELDGELDSDSETGKEKHDDESSLDNINVKKIDNPIPSNA 780

Query: 781  PYVKDNADSSEQLSEIRTVVNSTTSTSKGQTSDRTVSSQLEDLLDKNLGLGPTKVLGRXX 840
            PYVKDNADSSEQLSEIRTVVNSTTSTSKGQTSDRTVSSQLEDLLDKNLGLGPTKVLGR  
Sbjct: 781  PYVKDNADSSEQLSEIRTVVNSTTSTSKGQTSDRTVSSQLEDLLDKNLGLGPTKVLGRSS 840

Query: 841  XXXXXXXXVADDIDDLDTKKTSVRDKPYISKADRRKLKKGQNVGDSTSDSPNGEAAKKPV 900
                    VADDIDDLDTKKTSVRDKPYISKADRRKLKKGQNVGDSTSDSPNGEAAKKPV
Sbjct: 841  LLSSNSASVADDIDDLDTKKTSVRDKPYISKADRRKLKKGQNVGDSTSDSPNGEAAKKPV 900

Query: 901  NSQQEKGKTIEKPANPKVSRGQXXXXXXXXXXYGEQDEEEREIRMALLASSGRASQKDKP 960
            NSQQEKGKTIEKPANPKVSRGQ          YGEQDEEEREIRMALLASSGRASQKDKP
Sbjct: 901  NSQQEKGKTIEKPANPKVSRGQKGKLKKIKEKYGEQDEEEREIRMALLASSGRASQKDKP 960

Query: 961  SEDVDGATAAQSKPSTGEDDRSKICYKCKKSGHLSRDCPESTSEVDPADVNVGRAKDGMD 1020
            SEDVDGATAAQSKPSTGEDDRSKICYKCKKSGHLSRDCPESTSEVDPADVNVGRAKDGMD
Sbjct: 961  SEDVDGATAAQSKPSTGEDDRSKICYKCKKSGHLSRDCPESTSEVDPADVNVGRAKDGMD 1020

Query: 1021 RSSAPAGSSVTMDEDDIHELGDEEKEKLIDLDYLTGNPLPSDILLYAVPVCAPYNALQAY 1080
            RSSAPAGSSVTMDEDDIHELGDEEKEKLIDLDYLTGNPLPSDILLYAVPVCAPYNALQAY
Sbjct: 1021 RSSAPAGSSVTMDEDDIHELGDEEKEKLIDLDYLTGNPLPSDILLYAVPVCAPYNALQAY 1080

Query: 1081 KYRVKITPXXXXXXXXXXXXMSLFLHTADATNREKELMKACTDPELVAAIVGNAKITAPG 1140
            KYRVKITP            MSLFLHTADATNREKELMKACTDPELVAAIVGNAKITAPG
Sbjct: 1081 KYRVKITPGTAKKGKAAKTAMSLFLHTADATNREKELMKACTDPELVAAIVGNAKITAPG 1140

Query: 1141 LT 1142
            LT
Sbjct: 1141 LT 1142



>AK059209 
          Length = 232

 Score =  426 bits (1094), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/224 (95%), Positives = 214/224 (95%)

Query: 684 MIRGKKNFLPPHPLVMGFGILFRLDESSLASHLNERRVRGEDEEALPDVESQKLESNAEL 743
           MIRGKKNFLPPHPLVMGFGILFRLDESSLASHLNERRVRGEDEEALPDVESQKLESNAEL
Sbjct: 1   MIRGKKNFLPPHPLVMGFGILFRLDESSLASHLNERRVRGEDEEALPDVESQKLESNAEL 60

Query: 744 DGELDSDSETGKEKHDDESSLDNINVKKIDNPIPSNAPYVKDNADSSEQLSEIRTVVNST 803
           DGELDSDSETGKEKHDDESSLDNINVKKIDNPIPSNAPYVKDNADSSEQLSEIRTVVNST
Sbjct: 61  DGELDSDSETGKEKHDDESSLDNINVKKIDNPIPSNAPYVKDNADSSEQLSEIRTVVNST 120

Query: 804 TSTSKGQTSDRTVSSQLEDLLDKNLGLGPTKVLGRXXXXXXXXXXVADDIDDLDTKKTSV 863
           TSTSKGQTSDRTVSSQLEDLLDKNLGLGPTKVLGR          VADDIDDLDTKKTSV
Sbjct: 121 TSTSKGQTSDRTVSSQLEDLLDKNLGLGPTKVLGRSSLLSSNSASVADDIDDLDTKKTSV 180

Query: 864 RDKPYISKADRRKLKKGQNVGDSTSDSPNGEAAKKPVNSQQEKG 907
           RDKPYISKADRRKLKKGQNVGDSTSDSPNGEAAKKPVNSQQEKG
Sbjct: 181 RDKPYISKADRRKLKKGQNVGDSTSDSPNGEAAKKPVNSQQEKG 224



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.312    0.129    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 34,978,565
Number of extensions: 1423572
Number of successful extensions: 4824
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4823
Number of HSP's successfully gapped: 2
Length of query: 1159
Length of database: 17,035,801
Length adjustment: 112
Effective length of query: 1047
Effective length of database: 11,187,833
Effective search space: 11713661151
Effective search space used: 11713661151
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 162 (67.0 bits)