BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0170800 Os12g0170800|AK059809
         (210 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0170800  Similar to Citrate binding protein precursor        393   e-110
Os12g0166300                                                      206   9e-54
Os12g0165400  Concanavalin A-like lectin/glucanase domain co...   168   3e-42
Os12g0171100                                                      112   3e-25

>Os12g0170800 Similar to Citrate binding protein precursor
          Length = 210

 Score =  393 bits (1009), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 22  DPRDGFTAVSLGDGNFQLQWPYDVESSSRYSFDGTVRRLWVFSDDKPFKPQSGTNPRTEI 81
           DPRDGFTAVSLGDGNFQLQWPYDVESSSRYSFDGTVRRLWVFSDDKPFKPQSGTNPRTEI
Sbjct: 22  DPRDGFTAVSLGDGNFQLQWPYDVESSSRYSFDGTVRRLWVFSDDKPFKPQSGTNPRTEI 81

Query: 82  RMTGYDYSSGVWQFEGTGYVPSGTTGVSIMQVFGGGTATTLMLHVYGGDLWYYHQQVVET 141
           RMTGYDYSSGVWQFEGTGYVPSGTTGVSIMQVFGGGTATTLMLHVYGGDLWYYHQQVVET
Sbjct: 82  RMTGYDYSSGVWQFEGTGYVPSGTTGVSIMQVFGGGTATTLMLHVYGGDLWYYHQQVVET 141

Query: 142 NIYDRWFRLNVIHDVAASQLTVFIDGRERLRVAGKGGDSHYFKFGVYMQTNPSNRMESRW 201
           NIYDRWFRLNVIHDVAASQLTVFIDGRERLRVAGKGGDSHYFKFGVYMQTNPSNRMESRW
Sbjct: 142 NIYDRWFRLNVIHDVAASQLTVFIDGRERLRVAGKGGDSHYFKFGVYMQTNPSNRMESRW 201

Query: 202 KGISILNKT 210
           KGISILNKT
Sbjct: 202 KGISILNKT 210



>Os12g0166300 
          Length = 209

 Score =  206 bits (525), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 102/193 (52%), Positives = 132/193 (68%), Gaps = 4/193 (2%)

Query: 22  DPRDGFTAVSLGDGNFQLQWPYDVESSSRYSFDGTVRRLWVFSDDKPFKPQSGTNPRTEI 81
           +P  GF  V L  G+FQ+Q PYDV  S R+ +   V   WV+  DKPF   + TNPRTE+
Sbjct: 16  NPTAGFAKVDLTGGDFQVQRPYDVPESRRFRYRDGVWTFWVYDSDKPFNTATHTNPRTEV 75

Query: 82  RMTGYDYSSGVWQFEGTGYVPSGTTGVSIMQVF---GGGTATTLMLHVYGGDLWYYHQQV 138
           R+ G+DYSSGVWQFEG GYVPSGT+GVS+MQ+    G   AT LMLHVY G L +Y    
Sbjct: 76  RLRGHDYSSGVWQFEGYGYVPSGTSGVSVMQIHNEEGAEHATILMLHVYDGVLRFYDGPA 135

Query: 139 VETNIYDRWFRLNVIHDVAASQLTVFIDGRERLRVAGKGGDSHYFKFGVYMQTNP-SNRM 197
           +E+NIY+RWFRLNV+HDV AS + V+IDG+++        +S+YFKFGVYMQ    SN M
Sbjct: 136 IESNIYNRWFRLNVVHDVKASTVAVYIDGKQKFSTNVIPSESYYFKFGVYMQHRDWSNCM 195

Query: 198 ESRWKGISILNKT 210
           ES+W  +++  K+
Sbjct: 196 ESQWTNVTVYTKS 208



>Os12g0165400 Concanavalin A-like lectin/glucanase domain containing protein
          Length = 195

 Score =  168 bits (425), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/192 (47%), Positives = 110/192 (57%), Gaps = 32/192 (16%)

Query: 22  DPRDGFTAVSLGDGNFQLQWPYDVESSSRYSFDGTVRRLWVFSDDKPFKPQSGTNPRTEI 81
           DP  GF AV L    F+L  PYD+    RY F   VRR+WV   D+PF P S T PR+EI
Sbjct: 29  DPTAGFAAVELTGDMFKLHKPYDLPPEQRYEFRDGVRRMWVLCSDRPFSPGSTTKPRSEI 88

Query: 82  RMTGYDYSSGVWQFEGTGYVPSGTTGVSIMQVFGG-GTATTLMLHVYGGDLWYYHQQ--V 138
                                       ++ VFG  G  TTLMLHVYGG L YYH +  V
Sbjct: 89  ----------------------------LLNVFGASGRNTTLMLHVYGGRLMYYHDEARV 120

Query: 139 VETNIYDRWFRLNVIHDVA-ASQLTVFIDGRERLRVAGKGGDSHYFKFGVYMQTNPSNRM 197
           V+ +IYDRWFRLNV+HDVA   +L VF+DG  RL V G GG  HYFKF VY+Q +PS+ M
Sbjct: 121 VDGDIYDRWFRLNVVHDVAGVGKLAVFVDGERRLAVPGHGGYRHYFKFVVYVQRDPSHYM 180

Query: 198 ESRWKGISILNK 209
           ESRW+ + +  K
Sbjct: 181 ESRWRDVKVYTK 192



>Os12g0171100 
          Length = 79

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 52/63 (82%), Positives = 56/63 (88%)

Query: 22 DPRDGFTAVSLGDGNFQLQWPYDVESSSRYSFDGTVRRLWVFSDDKPFKPQSGTNPRTEI 81
          DP DGFTAV LG+ NFQLQWPYDV++SSRYSFDGTVRRLWVFSDDKP  P+S T PRTEI
Sbjct: 14 DPTDGFTAVRLGERNFQLQWPYDVKNSSRYSFDGTVRRLWVFSDDKPHTPRSKTKPRTEI 73

Query: 82 RMT 84
          RMT
Sbjct: 74 RMT 76



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.137    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,542,309
Number of extensions: 338645
Number of successful extensions: 602
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 597
Number of HSP's successfully gapped: 4
Length of query: 210
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 114
Effective length of database: 12,023,257
Effective search space: 1370651298
Effective search space used: 1370651298
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)