BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0106900 Os12g0106900|AK102466
         (250 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0106900  Hemopexin domain containing protein                 433   e-122
Os07g0239000                                                      195   3e-50
Os03g0842600                                                       79   3e-15

>Os12g0106900 Hemopexin domain containing protein
          Length = 250

 Score =  433 bits (1113), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 213/250 (85%), Positives = 213/250 (85%)

Query: 1   MMGSAQDWAFGWQPWTGPALEDLLPQLSHEEQLRLHNHLREHERILKWHNKNSPPISSLH 60
           MMGSAQDWAFGWQPWTGPALEDLLPQLSHEEQLRLHNHLREHERILKWHNKNSPPISSLH
Sbjct: 1   MMGSAQDWAFGWQPWTGPALEDLLPQLSHEEQLRLHNHLREHERILKWHNKNSPPISSLH 60

Query: 61  SEGERDFFIIIHVRYALHHYNAKHPDEEFDAVKPLMESSVRFRGQVWFHINFWAXXXXXX 120
           SEGERDFFIIIHVRYALHHYNAKHPDEEFDAVKPLMESSVRFRGQVWFHINFWA      
Sbjct: 61  SEGERDFFIIIHVRYALHHYNAKHPDEEFDAVKPLMESSVRFRGQVWFHINFWARSRKSK 120

Query: 121 XXXXFFAEVHYKXXXXXXXVCSYLPFPVPGAERXXXXXXXXXXXXXXXXXXXXEACTIIE 180
               FFAEVHYK       VCSYLPFPVPGAER                    EACTIIE
Sbjct: 121 KIKRFFAEVHYKPPSSSSSVCSYLPFPVPGAERPPSSSSVSSDLLLPLPIPVVEACTIIE 180

Query: 181 EPLGQYRKSCAFCRGHLDILHPMGRKFVCGNDKDRFEQQLLPCGSIGLEMPFTCRLGPAS 240
           EPLGQYRKSCAFCRGHLDILHPMGRKFVCGNDKDRFEQQLLPCGSIGLEMPFTCRLGPAS
Sbjct: 181 EPLGQYRKSCAFCRGHLDILHPMGRKFVCGNDKDRFEQQLLPCGSIGLEMPFTCRLGPAS 240

Query: 241 VNSSHGEKED 250
           VNSSHGEKED
Sbjct: 241 VNSSHGEKED 250



>Os07g0239000 
          Length = 220

 Score =  195 bits (495), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/236 (47%), Positives = 136/236 (57%), Gaps = 27/236 (11%)

Query: 6   QDWAFGWQP-WTGPALEDLLPQLSHEEQLRLHNHLREHERILKWHN-KNSPPISSL---H 60
           +DW  G +  WT PA E+LLPQL   EQLRL  HL + +R  +     N+PP SS     
Sbjct: 2   EDWVMGSESGWTSPAFEELLPQLPRGEQLRLETHLHDRDRRWRRMRYNNTPPPSSTKIRR 61

Query: 61  SEGERDFFIIIHVRYALHHYNAKHPDEEFDAVKPLMESSVRFRGQVWFHINFWAXXXXXX 120
            E ERD ++I HV+ AL HYNA+HP  EFD VKPLM++ V F+GQ WFHINFWA      
Sbjct: 62  QEKERDTWMIPHVQNALRHYNARHPGGEFDVVKPLMQARVVFKGQHWFHINFWARSRSSN 121

Query: 121 XXXXFFAEVHYKXXXXXXXVCSY---LPFPVPGAERXXXXXXXXXXXXXXXXXXXXEACT 177
               FFAE+HYK         S+   LP P+P                        E CT
Sbjct: 122 KIKRFFAELHYKPLITISGFVSWEQLLPDPLPAP------------------VAIVETCT 163

Query: 178 IIEEPLGQYRKSCAFCRGHLDILHPMG-RKFVCGNDKDRFEQQLLPCGSIGLEMPF 232
           IIEEPL QY++SCAFC    DILHP G RKFVCGNDKDRF Q+L+PC  +   +PF
Sbjct: 164 IIEEPLDQYKRSCAFCPAGFDILHPKGDRKFVCGNDKDRFYQKLIPCKQLQFGLPF 219



>Os03g0842600 
          Length = 193

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 73/175 (41%), Gaps = 39/175 (22%)

Query: 63  GERDFFIIIHVRYALHHYNAKHPDEEFDAVKPLMESSVRFRGQVWFHINFWAXXXXXXXX 122
           G RD + I   R ALHHYNA HP  E+D VKPLM + V FRG++W H++F A        
Sbjct: 42  GVRDGYSIWKARAALHHYNANHPGAEYDLVKPLMAACVIFRGKLWHHVSFLAHRRDQLVA 101

Query: 123 ---XXFFAEVHYKXXXXXXXVCSYLPFPVPGAERXXXXXXXXXXXXXXXXXXXXEACTII 179
                FFAE+          V                                 EACT+I
Sbjct: 102 PPVEYFFAELRDGCSDDDSIV---------------------------------EACTMI 128

Query: 180 EEPLGQYRKSCAFCRGHLDILHPMGRKFVCGNDKDRFEQQLLPCGSIGLEMPFTC 234
           E P       C+FC     I HP  ++ +CG  K+   +  +   ++   MPFTC
Sbjct: 129 ENPQSCSGNKCSFCPEQYQIAHPSEQELLCG--KEEHAKDFIRLMNMS-PMPFTC 180



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.140    0.471 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,465,298
Number of extensions: 318802
Number of successful extensions: 605
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 601
Number of HSP's successfully gapped: 3
Length of query: 250
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 152
Effective length of database: 11,918,829
Effective search space: 1811662008
Effective search space used: 1811662008
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 155 (64.3 bits)