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Os12g0106900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hemopexin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.00854) R2 : 7.5e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00333 (0.018) R2dN8 : 9.68e-05 R2N8 : 7.5e-05
σ : 0.161
deviance : 11.88
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
7.92 0.132 12.6 0.305 0.11 0.219 0.094 -0.0885 -0.00289 11 1006 154 -- --
7.94 0.131 12.6 0.302 0.111 0.22 0.0873 -- -0.00278 10.9 1006 157 -- --
7.96 0.131 12.6 0.31 0.11 0.216 -- -0.0737 -0.00068 10.8 1006 154 -- --
7.97 0.131 12.6 0.305 0.11 0.219 -- -- -0.00178 10.8 1006 157 -- --
8.68 0.137 12.6 0.309 -- 0.245 -- -0.0821 -0.00611 -- 1006 232 -- --
8.63 0.138 12.6 0.294 0.124 -- 0.0568 -- 0.0298 10.7 -- -- -- --
8.65 0.138 12.6 0.297 0.124 -- -- -- 0.0299 10.6 -- -- -- --
8.69 0.137 12.6 0.306 -- 0.247 -- -- -0.00596 -- 1006 241 -- --
10.42 0.15 12.6 -- 0.111 0.199 -- -- -0.0314 10.5 1006 139 -- --
9.6 0.145 12.6 0.294 -- -- -- -- 0.0293 -- -- -- -- --
10.96 0.155 12.6 -- 0.122 -- -- -- -0.00311 10.4 -- -- -- --
11.14 0.155 12.6 -- -- 0.223 -- -- -0.0372 -- 1006 196 -- --
11.88 0.161 12.6 -- -- -- -- -- -0.00333 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 7.24 temperature 25.0 90 < th dose independent rect. 1 5
2 7.25 temperature 25.0 270 < th dose independent rect. 1 2
3 7.26 wind 9.0 270 < th dose independent rect. 1 2
4 7.26 temperature 10.0 270 > th dose independent rect. 1 2
7 7.26 humidity 50.0 270 > th dose independent rect. 1 2
10 7.26 atmosphere 995.0 270 > th dose independent rect. 1 2
11 7.26 atmosphere 1010.0 270 < th dose independent rect. 1 2
13 7.26 radiation 1.0 270 < th dose independent rect. 1 2
18 7.26 precipitation 0.1 270 < th dose independent rect. 1 2
20 7.26 precipitation 0.1 90 < th dose independent rect. 6 19
21 7.26 temperature 10.0 270 > th dose independent rect. 3 22
22 7.26 radiation 1.0 270 < th dose dependent rect. 1 2
27 7.26 precipitation 0.1 270 < th dose dependent rect. 1 2
28 7.26 precipitation 0.1 90 < th dose dependent rect. 6 19
29 7.27 atmosphere 1010.0 10 < th dose independent rect. 16 14
31 7.28 wind 9.0 10 < th dose independent rect. 6 19
33 7.28 humidity 50.0 270 > th dose dependent rect. 1 2
34 7.28 wind 9.0 10 < th dose dependent rect. 1 5
36 7.29 wind 1.0 270 > th dose independent rect. 1 2
37 7.29 precipitation 0.1 10 < th dose independent rect. 1 5
39 7.29 precipitation 0.1 10 < th dose dependent rect. 1 5
40 7.30 wind 9.0 10 < th dose independent rect. 1 5
41 7.30 temperature 10.0 10 > th dose independent rect. 1 5
43 7.30 temperature 30.0 10 < th dose independent rect. 1 5
44 7.30 humidity 50.0 10 > th dose independent rect. 1 5
47 7.30 atmosphere 995.0 10 > th dose independent rect. 1 5
48 7.30 atmosphere 1010.0 10 < th dose independent rect. 1 5
50 7.30 atmosphere 1015.0 1440 < th dose independent rect. 2 5
51 7.30 radiation 20.0 10 < th dose independent rect. 1 5
54 7.30 temperature 15.0 10 > th dose independent rect. 16 14
55 7.30 temperature 10.0 10 > th dose independent rect. 6 19
80 7.31 wind 9.0 270 < th dose independent rect. 3 22
82 7.31 humidity 50.0 10 > th dose dependent rect. 1 5
83 7.31 radiation 10.0 90 < th dose dependent rect. 1 5
105 7.32 wind 9.0 1440 < th dose independent rect. 2 5
108 7.32 temperature 10.0 1440 > th dose independent rect. 2 5
112 7.32 temperature 30.0 1440 < th dose independent rect. 2 5
119 7.32 humidity 50.0 1440 > th dose independent rect. 2 5
125 7.32 atmosphere 995.0 1440 > th dose independent rect. 2 5
132 7.32 radiation 40.0 1440 < th dose independent rect. 2 5
139 7.32 temperature 10.0 1440 > th dose independent rect. 7 19
150 7.32 temperature 10.0 10 > th dose dependent rect. 1 5
151 7.32 radiation 40.0 10 < th dose dependent rect. 1 5
158 7.33 wind 9.0 270 < th dose dependent rect. 1 1
166 7.34 precipitation 0.1 270 < th dose independent rect. 3 22
169 7.34 temperature 10.0 270 > th dose dependent rect. 1 2
174 7.34 temperature 30.0 10 < th dose dependent rect. 19 6
176 7.34 precipitation 0.1 270 < th dose dependent rect. 3 22
188 7.36 temperature 15.0 270 > th dose independent rect. 13 15
208 7.37 temperature 10.0 270 > th dose independent rect. 4 20
211 7.37 atmosphere 1015.0 270 < th dose dependent rect. 1 2
241 7.38 wind 1.0 270 > th dose independent rect. 24 4
277 7.39 wind 9.0 270 < th dose independent rect. 4 20
318 7.42 atmosphere 995.0 30 > th dose dependent rect. 6 19
321 7.43 radiation 20.0 4320 < th dose independent rect. 2 4
325 7.43 wind 1.0 30 > th dose independent rect. 6 19
326 7.43 wind 1.0 270 > th dose independent rect. 4 20
396 7.46 atmosphere 1010.0 10 < th dose independent rect. 9 21
401 7.46 atmosphere 1015.0 90 < th dose dependent rect. 1 4
404 7.46 radiation 1.0 90 < th dose dependent rect. 1 9
478 7.47 temperature 10.0 10 > th dose dependent rect. 16 14
479 7.47 radiation 1.0 90 < th dose dependent rect. 1 17
488 7.48 atmosphere 995.0 10 > th dose independent rect. 6 19
489 7.48 radiation 1.0 270 < th dose independent rect. 4 20
498 7.48 atmosphere 1015.0 10 < th dose dependent rect. 1 5
503 7.48 radiation 40.0 10 < th dose dependent rect. 12 18
506 7.49 temperature 25.0 90 < th dose independent rect. 3 2
545 7.50 atmosphere 1010.0 10 < th dose independent rect. 13 17
558 7.50 wind 9.0 30 < th dose dependent rect. 16 14
564 7.50 radiation 20.0 10 < th dose dependent rect. 9 21
574 7.51 radiation 1.0 90 < th dose independent rect. 1 17
599 7.52 atmosphere 995.0 10 > th dose independent rect. 16 14
601 7.52 atmosphere 1010.0 90 < th dose independent rect. 11 19
619 7.52 atmosphere 995.0 10 > th dose dependent rect. 6 10
652 7.53 atmosphere 995.0 270 > th dose dependent rect. 1 2
657 7.53 atmosphere 995.0 10 > th dose dependent rect. 1 5
664 7.53 radiation 10.0 14400 < th dose dependent rect. 20 6
667 7.53 atmosphere 1005.0 90 > th dose dependent rect. 23 12
680 7.54 atmosphere 1010.0 270 < th dose independent rect. 13 15
741 7.55 temperature 15.0 720 > th dose independent rect. 7 14
745 7.55 atmosphere 1010.0 10 < th dose independent rect. 11 19
752 7.55 temperature 30.0 270 < th dose dependent rect. 1 2
783 7.55 radiation 1.0 270 < th dose dependent rect. 4 20
785 7.56 humidity 90.0 90 > th dose independent rect. 3 2
790 7.56 wind 1.0 30 > th dose independent rect. 19 6
848 7.56 radiation 40.0 10 < th dose dependent rect. 16 14
904 7.57 temperature 15.0 720 > th dose independent rect. 9 10
961 7.58 temperature 10.0 10 > th dose independent rect. 6 10
963 7.58 atmosphere 1015.0 10 < th dose independent rect. 6 10
966 7.58 radiation 40.0 10 < th dose independent rect. 16 14
968 7.58 temperature 15.0 10 > th dose independent rect. 13 17
970 7.58 atmosphere 995.0 30 > th dose independent rect. 1 18