BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0261900 Os11g0261900|AK107273
(419 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0261900 Metallophosphoesterase domain containing protein 652 0.0
Os10g0394100 Metallophosphoesterase domain containing protein 101 9e-22
>Os11g0261900 Metallophosphoesterase domain containing protein
Length = 419
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/419 (80%), Positives = 339/419 (80%)
Query: 1 MATAAAADVPSCRDLPXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXXXXXXXRL 60
MATAAAADVPSCRDLP GI RL
Sbjct: 1 MATAAAADVPSCRDLPAAVSAFADAFVDFAVSGIFFPSTPTPSPPPPPTPTTFLPSPTRL 60
Query: 61 VAIGDLHGDLPKSLSALRLAGLVPPHDPTSWSAGPTLAVQLGDILDRGGDEXXXXXXXXX 120
VAIGDLHGDLPKSLSALRLAGLVPPHDPTSWSAGPTLAVQLGDILDRGGDE
Sbjct: 61 VAIGDLHGDLPKSLSALRLAGLVPPHDPTSWSAGPTLAVQLGDILDRGGDEIRLLYLIRR 120
Query: 121 XXXXXXGQGGALLPIMGNHEVMNVSGDFRFATPQGLREFSAWAGWYRAGLAIKRRCARXX 180
GQGGALLPIMGNHEVMNVSGDFRFATPQGLREFSAWAGWYRAGLAIKRRCAR
Sbjct: 121 LAISAAGQGGALLPIMGNHEVMNVSGDFRFATPQGLREFSAWAGWYRAGLAIKRRCARGG 180
Query: 181 XXXXXXXKNPFLGIPKEFPGVKPEFWDGIRSRLAALLPDGPIARRFLADLPTVLVVGDSV 240
KNPFLGIPKEFPGVKPEFWDGIRSRLAALLPDGPIARRFLADLPTVLVVGDSV
Sbjct: 181 DGGDPPPKNPFLGIPKEFPGVKPEFWDGIRSRLAALLPDGPIARRFLADLPTVLVVGDSV 240
Query: 241 FVHGGLLEANVEYGLERINAEVSEWIRGERGANAVAPEFVRGRDAVVWLRRFSDGVNCDC 300
FVHGGLLEANVEYGLERINAEVSEWIRGERGANAVAPEFVRGRDAVVWLRRFSDGVNCDC
Sbjct: 241 FVHGGLLEANVEYGLERINAEVSEWIRGERGANAVAPEFVRGRDAVVWLRRFSDGVNCDC 300
Query: 301 QRLEGVLGMIPGAKRMIMGHTIQTEGINAVCGAQAVRVDVGLSRGCGNGLPEVLEINGGG 360
QRLEGVLGMIPGAKRMIMGHTIQTEGINAVCGAQAVRVDVGLSRGCGNGLPEVLEINGGG
Sbjct: 301 QRLEGVLGMIPGAKRMIMGHTIQTEGINAVCGAQAVRVDVGLSRGCGNGLPEVLEINGGG 360
Query: 361 TNVRVITTDPAEAWQYRKQGAEKAAIATXXXXXXXXXXXXXXXXVRESHGLKEVQAKAA 419
TNVRVITTDPAEAWQYRKQGAEKAAIAT VRESHGLKEVQAKAA
Sbjct: 361 TNVRVITTDPAEAWQYRKQGAEKAAIATAVKEKKGEVKEGLALLVRESHGLKEVQAKAA 419
>Os10g0394100 Metallophosphoesterase domain containing protein
Length = 310
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 59 RLVAIGDLHGDLPKSLSALRLAGLVPPH-DPTSWSAGPTLAVQLGDILDRGGDEXXXXXX 117
R+VA+GDLHGDL ++ +AL +AGL+ D W+ G T+ VQ+GDILDRG DE
Sbjct: 87 RIVAVGDLHGDLNQTRAALVMAGLLSSESDGHVWTGGQTVLVQVGDILDRGEDEIAILSL 146
Query: 118 XXXXXXXXXGQGGALLPIMGNHEVMNVSGDFRFATPQGLRE---FSAW-----AGWYRAG 169
QGGA+ + GNHE +NV GD+R+ P E F + W A
Sbjct: 147 LSSLNMQAKSQGGAVFQVNGNHETINVEGDYRYVDPGAFDECIRFMEYLDECDGNWDDAF 206
Query: 170 LAIKRRCARXXXXXXXXXKNPFLGIPKEFPGVKPEFWDGIRSRLAALLPDGPIARRFLAD 229
L C R + P F VK + GI +R + GP+A LA
Sbjct: 207 LNWVNVCERWKEEYPMSPNGDWR--PWNF--VKKQ--KGIAARSSLFKRGGPLACE-LAR 259
Query: 230 LPTVLVVGDSVFVHGGLLEANVE 252
P VL V D +F HGGLL +V
Sbjct: 260 HPVVLSVNDWIFCHGGLLPHHVH 282
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,064,317
Number of extensions: 526680
Number of successful extensions: 1037
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1033
Number of HSP's successfully gapped: 2
Length of query: 419
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 316
Effective length of database: 11,657,759
Effective search space: 3683851844
Effective search space used: 3683851844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)