Os10g0394100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Metallophosphoesterase domain containing protein.
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Os10g0394100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Metallophosphoesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.22 | 0.374 | 12.5 | 0.229 | 0.909 | -0.702 | -0.467 | 0.315 | -0.0929 | 2.47 | 19.7 | 2829 | -- | -- |
| 63.41 | 0.371 | 12.5 | 0.223 | 0.918 | -0.773 | -0.445 | -- | -0.0933 | 2.45 | 19.8 | 2810 | -- | -- |
| 63.98 | 0.373 | 12.5 | 0.24 | 0.904 | -0.704 | -- | 0.294 | -0.0908 | 2.5 | 19.7 | 2881 | -- | -- |
| 64.11 | 0.373 | 12.5 | 0.203 | 0.904 | -0.765 | -- | -- | -0.0991 | 2.49 | 19.71 | 2881 | -- | -- |
| 104.97 | 0.48 | 12.5 | 0.00861 | -- | -0.593 | -- | 0.245 | -0.151 | -- | 19.8 | 3147 | -- | -- |
| 73.98 | 0.403 | 12.6 | -0.217 | 0.882 | -- | -0.412 | -- | -0.283 | 2.43 | -- | -- | -- | -- |
| 74.59 | 0.404 | 12.6 | -0.206 | 0.882 | -- | -- | -- | -0.281 | 2.46 | -- | -- | -- | -- |
| 105.27 | 0.48 | 12.6 | -0.0294 | -- | -0.608 | -- | -- | -0.16 | -- | 19.71 | 2881 | -- | -- |
| 64.81 | 0.375 | 12.5 | -- | 0.909 | -0.652 | -- | -- | -0.142 | 2.49 | 19.7 | 2810 | -- | -- |
| 120.38 | 0.513 | 12.6 | -0.169 | -- | -- | -- | -- | -0.259 | -- | -- | -- | -- | -- |
| 75.71 | 0.407 | 12.6 | -- | 0.878 | -- | -- | -- | -0.258 | 2.46 | -- | -- | -- | -- |
| 104.91 | 0.479 | 12.5 | -- | -- | -0.59 | -- | -- | -0.149 | -- | 20.2 | 1728 | -- | -- |
| 121.13 | 0.514 | 12.6 | -- | -- | -- | -- | -- | -0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 6 |
| 2 | 61.74 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 3 | 61.74 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 4 | 61.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 6 |
| 10 | 61.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 11 | 61.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 24 | 62.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 27 | 62.09 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 83 | 62.54 | radiation | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 99 | 62.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 108 | 62.69 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 143 | 62.97 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 149 | 63.02 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 158 | 63.05 | temperature | 10 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 160 | 63.07 | temperature | 10 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 184 | 63.20 | temperature | 10 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 194 | 63.24 | temperature | 10 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 205 | 63.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 245 | 63.43 | temperature | 10 | 43200 | < th | dose dependent | rect. | 2 | 19 |
| 267 | 63.46 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 294 | 63.51 | temperature | 20 | 4320 | > th | dose independent | rect. | 11 | 16 |
| 299 | 63.52 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 8 | 16 |
| 306 | 63.52 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 13 | 10 |
| 347 | 63.57 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 7 | 17 |
| 353 | 63.59 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 11 | 12 |
| 361 | 63.60 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 18 |
| 372 | 63.62 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 384 | 63.64 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 389 | 63.64 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 9 | 14 |
| 391 | 63.65 | atmosphere | 995 | 43200 | < th | dose independent | sin | 20 | NA |
| 393 | 63.65 | temperature | 20 | 4320 | < th | dose independent | rect. | 11 | 16 |
| 396 | 63.66 | wind | 1 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 439 | 63.69 | atmosphere | 995 | 43200 | > th | dose independent | sin | 20 | NA |
| 441 | 63.69 | humidity | 50 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 442 | 63.69 | humidity | 50 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 448 | 63.69 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 20 |
| 485 | 63.75 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 498 | 63.75 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 500 | 63.76 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 514 | 63.78 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 16 |
| 521 | 63.79 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 535 | 63.81 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 4 | 14 |
| 549 | 63.82 | humidity | 60 | 43200 | < th | dose dependent | rect. | 21 | 11 |
| 578 | 63.86 | atmosphere | 995 | 43200 | > th | dose independent | sin | 1 | NA |
| 602 | 63.88 | atmosphere | 995 | 43200 | < th | dose independent | sin | 1 | NA |
| 614 | 63.89 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 618 | 63.89 | temperature | 10 | 43200 | < th | dose dependent | sin | 2 | NA |
| 649 | 63.94 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 10 |
| 670 | 63.96 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 12 |
| 690 | 63.98 | temperature | 10 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 703 | 63.98 | temperature | 10 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 717 | 63.99 | temperature | 10 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 741 | 64.01 | temperature | 10 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 800 | 64.04 | humidity | 70 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 807 | 64.04 | temperature | 10 | 43200 | > th | dose independent | rect. | 2 | 15 |
| 826 | 64.05 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 827 | 64.05 | temperature | 10 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 841 | 64.06 | temperature | 10 | 43200 | > th | dose independent | rect. | 14 | 15 |
| 872 | 64.07 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 14 | 8 |
| 881 | 64.08 | humidity | 50 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 888 | 64.08 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 955 | 64.12 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 958 | 64.13 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 959 | 64.13 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 1 |