BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0175000 Os11g0175000|AK109815
(407 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0175000 Protein of unknown function DUF1618 domain con... 685 0.0
Os11g0174600 235 4e-62
Os11g0174700 198 6e-51
Os11g0174432 186 3e-47
Os11g0174900 163 2e-40
Os11g0174366 149 5e-36
Os11g0174950 140 1e-33
Os08g0328500 135 6e-32
Os11g0175200 117 2e-26
Os11g0174500 82 7e-16
>Os11g0175000 Protein of unknown function DUF1618 domain containing protein
Length = 407
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/407 (84%), Positives = 343/407 (84%)
Query: 1 MDLVADHDDHSVVLLEMRYDKEGYDEFGIDYFVYNYAAAXXXXXXXXXXXXXXXXXXXXX 60
MDLVADHDDHSVVLLEMRYDKEGYDEFGIDYFVYNYAAA
Sbjct: 1 MDLVADHDDHSVVLLEMRYDKEGYDEFGIDYFVYNYAAADDDGDDDDPPRPPSLSLLPSY 60
Query: 61 XXXXXEDERRRRQDPKVHQLDADSTGLLXXXXXXHGEDDLVVAELITTXXXXXXXXXXXX 120
EDERRRRQDPKVHQLDADSTGLL HGEDDLVVAELITT
Sbjct: 61 WDPLDEDERRRRQDPKVHQLDADSTGLLRRRRRRHGEDDLVVAELITTRESESSKLEEVK 120
Query: 121 XXXXXXGEWSVTRAEIIHDGSKGEELSYWETDMAVPVGDRRLCWVDLYRGVILCGDDLFD 180
GEWSVTRAEIIHDGSKGEELSYWETDMAVPVGDRRLCWVDLYRGVILCGDDLFD
Sbjct: 121 LLVLRSGEWSVTRAEIIHDGSKGEELSYWETDMAVPVGDRRLCWVDLYRGVILCGDDLFD 180
Query: 181 EIPPRLQIDGDGDHTMLSWTMDAMIDATELWSLDAYAGIPRVIPEYPVISTDDADVICFL 240
EIPPRLQIDGDGDHTMLSWTMDAMIDATELWSLDAYAGIPRVIPEYPVISTDDADVICFL
Sbjct: 181 EIPPRLQIDGDGDHTMLSWTMDAMIDATELWSLDAYAGIPRVIPEYPVISTDDADVICFL 240
Query: 241 VTEPYNHKQGKPYFERTTWEMTMDTKNKTLLSVCTYDDDISQREPSYGHTYIPNNFATKP 300
VTEPYNHKQGKPYFERTTWEMTMDTKNKTLLSVCTYDDDISQREPSYGHTYIPNNFATKP
Sbjct: 241 VTEPYNHKQGKPYFERTTWEMTMDTKNKTLLSVCTYDDDISQREPSYGHTYIPNNFATKP 300
Query: 301 PPXXXXXXXXXXXXXXNGNNLSQSLPSAKHLQVSRMAPEEILVALEEIPELSRDDLLKAY 360
PP NGNNLSQSLPSAKHLQVSRMAPEEILVALEEIPELSRDDLLKAY
Sbjct: 301 PPAIICEATTTITTEINGNNLSQSLPSAKHLQVSRMAPEEILVALEEIPELSRDDLLKAY 360
Query: 361 SILCRDNGRLFRSLLGLPMSLRKKWLLIEIKACRDCPVCSACTTDGL 407
SILCRDNGRLFRSLLGLPMSLRKKWLLIEIKACRDCPVCSACTTDGL
Sbjct: 361 SILCRDNGRLFRSLLGLPMSLRKKWLLIEIKACRDCPVCSACTTDGL 407
>Os11g0174600
Length = 561
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 178/492 (36%), Positives = 224/492 (45%), Gaps = 107/492 (21%)
Query: 1 MDLVADHDDHSVVLLEMRYDKEGYDEFG--IDYFVYNYAAAXXXXXXXXXXXXXXXXXXX 58
M + A H D +VL+ Y +EGY+ ID ++YN AA
Sbjct: 86 MSVAAAHGDSLLVLVSFSY-QEGYEHHTDTIDKYLYNAGAAAAADPPRPPSLVHLPAYY- 143
Query: 59 XXXXXXXEDERRRRQDPKVHQLDADSTGLLXXXXXXHGEDDLVVAELITTXXXXXXXXXX 118
E P H LD +TGLL E DLVVA+LI
Sbjct: 144 -------NGEETTLPSPLPHDLDEKTTGLLRRG---EAEADLVVADLIVKDGGEADAPKE 193
Query: 119 XXXXXXXXGEWSVTRAEIIHDGSKGEELSYWETDMAVPVG-------------------- 158
GEWSV RA I+HD K EELS+WETDM VPVG
Sbjct: 194 AELLVLRSGEWSVVRAPIVHDDGKAEELSFWETDMVVPVGDRRLCWVDLCRGIILCDMFD 253
Query: 159 ----------------------DRRLCWVDLYRGVILCGDDLFD--EIPPRLQIDGDG-- 192
DRR C + R + G + ++ PR G
Sbjct: 254 DGDETLRPRYFSLPIEPPADDRDRRRCQMSKRRVCVTNGGTVLKLVDVSPRCCCGRRGAT 313
Query: 193 --DHT--------------------MLSWTMDAMIDATELWSLDAYAGIPRVIPEYPVIS 230
DH+ WTMDAM+DATELWSLDAYAG+PR+ P++P++S
Sbjct: 314 QCDHSSGVFVINTWTLHMDGDDDDMAAYWTMDAMVDATELWSLDAYAGVPRINPQFPIVS 373
Query: 231 TDDADVICFLVTEPYNHKQGKPYFERTTWEMTMDTKNKTLLSVCTYDDDISQREPSYGHT 290
DD D+ICF V P HK G+ + +W + +DT +KTL+SVC D+ S + SYG+
Sbjct: 374 MDDPDIICFQV--PEEHKIGR---KMQSWYIMLDTSSKTLMSVCRLDES-SSLQLSYGYA 427
Query: 291 YIP---------------NNFATKPPPXXXXXXXXXXXXXXNGNNLSQSL-PSAKHLQVS 334
Y NN TKP ++L S SAK+ +V+
Sbjct: 428 YFVSTVSHCFNSSDDGGFNNDVTKPALMIIDDKVATKNNIIANDSLQSSCESSAKNSKVN 487
Query: 335 RMAPEEILVALEEIPELSRDDLLKAYSILCRD-NGRLFRSLLGLPMSLRKKWLLIEIKAC 393
+P+EIL L+EIPELSRDDLL+AYS+LC D NGR SLLGLPMSLRK WLL+EIKA
Sbjct: 488 --SPKEILALLQEIPELSRDDLLRAYSLLCYDNNGRRLSSLLGLPMSLRKPWLLMEIKAS 545
Query: 394 RDCPVCSACTTD 405
C VC AC D
Sbjct: 546 EACSVCCACRAD 557
>Os11g0174700
Length = 559
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 207/460 (45%), Gaps = 99/460 (21%)
Query: 1 MDLVADHDDHSVVLLEMRYDK-EGYD-EFGIDYFVYNYAAAXXXXXXXXXXXXXXXXXXX 58
M +VA H D +LL M+Y K YD + G+DYF+YN AA
Sbjct: 110 MRVVAVHRDS--LLLRMQYRKGRAYDNDIGVDYFLYNAGAAATATLQKEEDDDEEDKEDD 167
Query: 59 XXXXXXXEDERRRRQDPK--VHQLDADSTGLLXXXXXXHGEDDLVVAELITTXXXXXXXX 116
RR PK V L +TG+L D +VVAELI
Sbjct: 168 GGEETYRGRGYRRWAAPKRWVRDLGVKTTGILHRRGDGDDGDLVVVAELIAKEEDGGTPE 227
Query: 117 XXXXXXXXXXGEWSVTRAEIIHDGSKGEELSYWETDMAVPVGDRRLCWVDLYRGVILCGD 176
GEW++TR ++HD K EE+S W++D+ VP+GD LCWVDLYRG+I+C
Sbjct: 228 ELLVLRSD--GEWTLTRPPVVHDDGKAEEVSRWKSDLVVPIGDTMLCWVDLYRGIIVC-- 283
Query: 177 DLFDEIP-----------PRLQID-GDGDHT----------------------------- 195
DLFDEIP P + D G GD++
Sbjct: 284 DLFDEIPQLRYVSLPVDAPAAKFDNGRGDYSINPRMCPRQKRSFWVSDNGGELRFLDVSP 343
Query: 196 --------------------MLSWTM---------DAMIDATELWSLDAYA--GIPRVIP 224
+ SWT+ DAM+DATELWSLDAY G+PRV P
Sbjct: 344 RCCCGDLGATTCNNARNAFVISSWTLKMNDMRWVMDAMVDATELWSLDAYTGHGLPRVRP 403
Query: 225 EYPVISTDDADVICFLVTEPYNHKQGKPYFERTTWEMTMDTKNKTLLSVCTYDDDISQRE 284
EYP++ DD ++ F+V E Y + + +R W + D ++K +LSV YD+ + +
Sbjct: 404 EYPLMIMDDPRLVFFVVQEEYQPEIS--FSDRGKWRVMFDMRSKKILSVSQYDESDTSWQ 461
Query: 285 PSYGHTYIPNNFATKPPPXXXXXXXXXXXXXXNGNNLSQSLPSAKHLQVSR---MAPEEI 341
P TY P+ + N + L +S+ +PEEI
Sbjct: 462 PYSWLTYFPSKISN-----------YFTSIGACSNVAKRPLIVTDKPAMSKGVVASPEEI 510
Query: 342 LVALEEIPELSRDDLLKAYSILCRDNGR-LFRSLLGLPMS 380
L ALEE+PEL DD+L+AYSILC D GR FRSLLGLP +
Sbjct: 511 LAALEEVPELDCDDMLRAYSILCDDIGRHRFRSLLGLPQT 550
>Os11g0174432
Length = 572
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 136/225 (60%), Gaps = 13/225 (5%)
Query: 189 DGDGDHTMLSWTMDAMIDATELWSLDAYAGIPRVIPEYPVISTDDADVICFLVTEPYNHK 248
DG GD ++WTMDAM+DA+ELWS AYAG+P IPE+P++S DD +I F+V E
Sbjct: 349 DGSGD---MAWTMDAMVDASELWSSHAYAGLPHAIPEHPIVSIDDPHLISFMVDE--RES 403
Query: 249 QGKPYFERTTWEMTMDTKNKTLLSV--CTYDDD-ISQREPSY---GHTYIPNNFATKPPP 302
+G+ + TW + DT++KTLLS C++ + + + SY + N A P
Sbjct: 404 EGRYCRIKETWMILFDTRSKTLLSAISCSHGRNFLPSKVSSYFTSSNGSCSNGGAMSEPA 463
Query: 303 XXXXXXXXXXXXXXNGNNLSQSLPSAKHLQVSR--MAPEEILVALEEIPELSRDDLLKAY 360
+ +S AKH +VS +P+EI ALEEIPELSR DLL+AY
Sbjct: 464 VIIDKAPTHDAIIGDSVRISCESSGAKHFRVSGSVASPDEIFAALEEIPELSRHDLLRAY 523
Query: 361 SILCRDNGRLFRSLLGLPMSLRKKWLLIEIKACRDCPVCSACTTD 405
S+LC DNGR F+SLLGLPMSLRK WLL+EI+ C DC VC C TD
Sbjct: 524 SMLCHDNGRRFKSLLGLPMSLRKTWLLMEIQTCEDCAVCCGCMTD 568
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 1 MDLVADHDDHSVVLLEMRYDKEGY---DEFGIDYFVYNYAAAXXXXXXXXXXXXXXXXXX 57
+ +VA H D VL+ + Y EGY D+ +DYFVYN +A
Sbjct: 95 LAVVAAHGDS--VLVRLSYQGEGYRYGDDGVLDYFVYNAGSAAADPPRPPSLSLLPAYVT 152
Query: 58 XXXXXXXXEDERRRRQDPKVHQLDADSTGLLXXXXXXHGEDDLVVAELITTXXXXXXXXX 117
E R R H LD +TGLL GEDD+VV +L
Sbjct: 153 TDADEEESETWRPR------HDLDERTTGLLR-----RGEDDMVVVDLAVMEEGDELEEA 201
Query: 118 XXXXXXXXXGEWSVTRAEIIHDGSKGEELSYWETDMAVPVGDRRLCWVDLYRGVILCG-D 176
GEW+VTRA ++H + E+L W TDMAVPVG+RR+CW DLYRG+ILC D
Sbjct: 202 ELLVLRS--GEWTVTRAPVVHFDGRAEKLPSWITDMAVPVGERRMCWADLYRGIILCDVD 259
Query: 177 DLFDEIP 183
D+FD+ P
Sbjct: 260 DVFDQNP 266
>Os11g0174900
Length = 534
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 129/216 (59%), Gaps = 13/216 (6%)
Query: 199 WTMDAMIDATELWSLDAYAGIPRVIPEYPVISTDDADVICFLVTEPYNHKQGKPYFERTT 258
W MDAM++A ELWSLDAYAG PR+ P YP++S D+ +ICF+V + H + + ERT
Sbjct: 317 WAMDAMVNAAELWSLDAYAGPPRLRPVYPIVSMDNPHIICFMVCK--EHWESCFHCERTI 374
Query: 259 WEMTMDTKNKTLLSVCTYDDDISQR-EPSYGHTYIP---NNFATKPPPXXXXXXXXXXXX 314
W++ D K+K LLS+ YD+ Q YG Y+P +++
Sbjct: 375 WKIIFDMKSKKLLSIRYYDESQCQTWGVHYGDDYLPSMISDYFNSNGKYTSHNATTSIND 434
Query: 315 XXNGNNLSQSLPSAKHLQV----SRMAPEEILVALEEIPELSRDDLLKAYSILCRDNGR- 369
N L QS S K L+V +++ EEI ALEEIP+L DDLLKAYSIL D G+
Sbjct: 435 LIVTNYLPQS--SHKGLKVVSSEVQVSDEEIFAALEEIPDLGCDDLLKAYSILSHDIGQH 492
Query: 370 LFRSLLGLPMSLRKKWLLIEIKACRDCPVCSACTTD 405
FRSLLGLPMSLRKKWLLIEIK+ +CSAC +
Sbjct: 493 RFRSLLGLPMSLRKKWLLIEIKSREASSICSACAAN 528
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 71 RRQDPKVHQLDADSTGLLXXXXXXHGEDDLVVAELITTXXXXXXXXXXXXXXXXXXGEWS 130
RRQ H LD +TGLL + +LVVAEL GEW+
Sbjct: 115 RRQ----HWLDVKTTGLLRRRRR---DGELVVAELTVKKGDTDDTPEDAELVVLRSGEWT 167
Query: 131 VTRAEIIHDGSKGEELSYWETDMAVPVGDRRLCWVDLYRGVI-LCGDDLFDEIPPR 185
VTRA IIHD K EE+S W TDM VPVGD LCWVDL RGVI L DLFDE PR
Sbjct: 168 VTRAPIIHDDGKAEEVSRWRTDMVVPVGDTLLCWVDLCRGVILLSASDLFDESRPR 223
>Os11g0174366
Length = 604
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 126/219 (57%), Gaps = 17/219 (7%)
Query: 197 LSWTMDAMIDATELWSLD--AYAGIP-RVIPEYPVISTDDADVICFLVTEPYNHKQGKPY 253
++WTMDA++DATELWSL A AGIP P YPV+ST D+ +ICFLV Y+H
Sbjct: 366 MTWTMDAIVDATELWSLSLHADAGIPPHKRPYYPVVSTRDSHIICFLV---YDHDY---C 419
Query: 254 FERTTWEMTMDTKNKTLLSVCTYDDDIS---QREPSYGHTYIPNNFA---TKPPPXXXXX 307
+ W++ +DT NKTL SV Y + S + PS Y+ + + TKP
Sbjct: 420 VKEKFWKIMLDTTNKTLPSVFAYKNQSSPCLRCIPSEISGYLLTSCSSDSTKPAAIVVDV 479
Query: 308 XXXXXXXXXNGNNLSQSLPSAKHLQVSRMA-PEEILVALEEIPELSRDDLLKAYSILCRD 366
+ VS MA PEEIL ALEEIP+L DDLL+AYS+L D
Sbjct: 480 LPAAAATTTTTTAVISKKSHELSTNVSEMASPEEILAALEEIPDLGCDDLLEAYSLLIND 539
Query: 367 -NGRLFRSLLGLPMSLRKKWLLIEIKACRDCPVCSACTT 404
+GR FRSLL LPM LRKKWLLIE+K + C +CSACTT
Sbjct: 540 GSGRRFRSLLVLPMGLRKKWLLIEVKNSQACSICSACTT 578
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 90/184 (48%), Gaps = 22/184 (11%)
Query: 3 LVADHDDHSVVLLEMRYDKEGY--DEFGIDYFVYNYAAAXXXXXXXXXXXXXXXXXXXXX 60
+VA H D VLL+M Y E E+G+ +FVY+ A
Sbjct: 103 VVAAHRDS--VLLQMHYKNEARRGGEYGLYHFVYSAGDAAAGDPPSLSLLPIHWVHYGL- 159
Query: 61 XXXXXEDERRRRQDPKVHQLDADSTGLLXXXXXXHGEDDLVVAELITTXXXXXXXXXXXX 120
D ++LD TGLL G++DLVV++L T
Sbjct: 160 ------------SDRTPNRLDDARTGLLRRRRRRCGDNDLVVSKLTVTEGDDGVDAELLV 207
Query: 121 XXXXXXGEWSVTRAEIIHDGSKGEELSYWETDMAVPVGDRRLCWVDLYRGVILCGDDLFD 180
GEWSVT AEIIHD K +EL +W+TDM VPVGDRRLCWVDLYRG+ILC D+FD
Sbjct: 208 FRS---GEWSVTPAEIIHDDGKADELFHWKTDMVVPVGDRRLCWVDLYRGIILC--DMFD 262
Query: 181 EIPP 184
+ P
Sbjct: 263 DDEP 266
>Os11g0174950
Length = 144
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 109/209 (52%), Gaps = 74/209 (35%)
Query: 197 LSWTMDAMIDATELWSLDAYAGIPRVIPEYPVISTDDADVICFLVTEPYNHKQGKPYFER 256
+ WTMDA++DAT+LWSLDAYA IP
Sbjct: 1 MEWTMDAIVDATKLWSLDAYASIP------------------------------------ 24
Query: 257 TTWEMTMDTKNKTLLSVCTYDDDISQREPSYGHTYIPNNFATKPPPXXXXXXXXXXXXXX 316
+C YD+D+ Q++PSYGHTYIP +T
Sbjct: 25 ----------------LCRYDNDVYQQKPSYGHTYIPCKIST-------------LYTNH 55
Query: 317 NGNNLSQSLPSAKHLQVSRMA-PEEILVALEEIPELSRDDLLKAYSILCRDNGRLFRSLL 375
+ NN P VSR+A PEEILVALE IP+ + DDLLKAY ILCRDNGRLFRSLL
Sbjct: 56 SSNNGVTKPP------VSRIASPEEILVALEAIPDHACDDLLKAYIILCRDNGRLFRSLL 109
Query: 376 GLPMSLRKKWLLIEIKACRDCPVCSACTT 404
GLPM LRKKWL+IEIKA ++ + S CT+
Sbjct: 110 GLPMGLRKKWLMIEIKAYQN--IYSTCTS 136
>Os08g0328500
Length = 527
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 160/354 (45%), Gaps = 75/354 (21%)
Query: 83 DSTGLLXXXXXXHGEDDLVVAELITTXXXX--XXXXXXXXXXXXXXGEWSVTRAEIIHDG 140
D+TG+L GEDDLVVAEL GEW V RA I H
Sbjct: 181 DATGILR-----RGEDDLVVAELTVEGKLRHDTLLGVVAKLLVFRSGEWGVKRAPINHGS 235
Query: 141 S------KGEELSY---WETDMAVPVGDRRLCWVDLY------------RGVILC--GDD 177
+G +L WETDM VPVGDR LC+VDL+ +G C
Sbjct: 236 GSGSSSSRGHDLPAPWPWETDMVVPVGDRLLCYVDLHHTTASSSSPTLSKGQTSCDRSSQ 295
Query: 178 LFDEIPPRLQIDGDGDHTMLSWTMDAMIDATELWSLDAYAGIPRVIPEYPVISTDDADVI 237
F L+I D + ++W MDAM+DA+ELWSLDAYAG+P V PEYPV++ DD +I
Sbjct: 296 AFVIRTWTLRIGDDVNGDDMAWEMDAMVDASELWSLDAYAGLPLVRPEYPVVNMDDPHLI 355
Query: 238 CFLVTEPYNHKQGKPYFERT----TWEMTMDTKNKTLLSVCTYDDDISQREPSYGHTYIP 293
VT ++G+ Y + T + + +DT+ KT+ SV + P G T +
Sbjct: 356 RLAVTG-ARQEEGRTYSDETDENYSSLIMVDTRRKTMPSVPPF-----LHLPFNGETLV- 408
Query: 294 NNFATKPPPXXXXXXXXXXXXXXNGNNLSQSLPSAKHLQV----------------SRMA 337
+ F++ G +LPS H+ + S A
Sbjct: 409 SRFSS--------YFNSNHSSNNGGGGGGGALPSKIHVNIEPPPPPAAVATGEPRTSDTA 460
Query: 338 PEEILVALEEIP----------ELSRDDLLKAYSILCRDNGRLFRSLLGLPMSL 381
+I++ LE DD+LKAY+IL +DNGR FRSLLGLPMS
Sbjct: 461 EPKIVLVLERFSWRLKGYSIQDMAGGDDMLKAYTILSQDNGRCFRSLLGLPMSF 514
>Os11g0175200
Length = 383
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 98/188 (52%), Gaps = 9/188 (4%)
Query: 1 MDLVADHDDHSVVLLEMRYDKEGYDEFGIDYFVYNYAAAXXXXXXXXXXXXXXXXXXXXX 60
+++VA H D VL+EM Y+K DE DYFVYN AA
Sbjct: 92 INVVAAHGDS--VLVEMHYEKGENDEH-FDYFVYNAGAAAVADEDGLPRPPPSLSLFPTY 148
Query: 61 XXXXXEDER---RRRQDPKVHQLDADSTGLLXXXXXXHGEDDLVVAELITTXXXXXXXXX 117
E E+ R Q K HQL STGLL + +LVVAEL+T
Sbjct: 149 WVPLSEVEKTAYRPHQSAKAHQLREGSTGLLVRRGGGG-DGELVVAELLTKRRRRRDTLE 207
Query: 118 XXXXXXXXXGEWSVTR-AEIIHDGSKGEELSYWETDMAVPVGDRRLCWVDLYRGVILCGD 176
GEWS T + I+HD KGEELSYWE DMAVPVGDRRLC+VDLYRGVILC D
Sbjct: 208 GAELVVLRSGEWSATPISPIVHDDGKGEELSYWEADMAVPVGDRRLCYVDLYRGVILC-D 266
Query: 177 DLFDEIPP 184
D+FDE P
Sbjct: 267 DVFDEQAP 274
>Os11g0174500
Length = 330
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 80 LDADSTGLLXXXXXXHGEDDLVVAELITTXXXXXXXXXXXXXXXXXXGEWSVTRAEIIHD 139
LD +TGLL G+DD+VV +L GEW+VTRA + H
Sbjct: 66 LDEKTTGLLR-----RGDDDMVVVDLAVLEGHGLEEEGDAELLVLRSGEWTVTRAPVAHF 120
Query: 140 GSKGEELSYWETDMAVPVGDRRLCWVDLYRGVILCGDDLFDEIP 183
+ ++ W TDMA+PV +RR+CW DLYRG+ILC DD+FD+ P
Sbjct: 121 VGRADKPPSWITDMAIPVSERRMCWADLYRGIILC-DDVFDQNP 163
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 186 LQIDGDGDHTMLSWTMDAMIDATELWSLDAYAGIPRVIPEYPVISTDDADVICFLVTEPY 245
L++D D D + WTMDAM+DATELWSL A AG+P+ P +PV S DD +ICF+V E
Sbjct: 236 LRMDDDDD---MVWTMDAMVDATELWSLHACAGLPQAKPIFPVASMDDPHLICFMVQERE 292
Query: 246 NHKQGKPYFE-RTTWEMTMDTKNKTLLSVCTYDD 278
+ + Y + TW + DT++K LLSVC+ D
Sbjct: 293 FEGRRRRYCHIKRTWMVMFDTRSKKLLSVCSCRD 326
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.138 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,695,123
Number of extensions: 549037
Number of successful extensions: 1105
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1081
Number of HSP's successfully gapped: 16
Length of query: 407
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 304
Effective length of database: 11,657,759
Effective search space: 3543958736
Effective search space used: 3543958736
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)