BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0158200 Os11g0158200|Os11g0158200
         (380 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os11g0158200  Pyridine nucleotide-disulphide oxidoreductase,...   681   0.0  
Os02g0150300  Pyridine nucleotide-disulphide oxidoreductase,...   330   8e-91

>Os11g0158200 Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
           domain containing protein
          Length = 380

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/380 (89%), Positives = 340/380 (89%)

Query: 1   MLRCDGDRXXXXXXXXXXXXXXKTLQNHADVVLIDPKEYFEIPWANLRAKMDPAAVARTV 60
           MLRCDGDR              KTLQNHADVVLIDPKEYFEIPWANLRAKMDPAAVARTV
Sbjct: 1   MLRCDGDRVVIVGGGIAGALLAKTLQNHADVVLIDPKEYFEIPWANLRAKMDPAAVARTV 60

Query: 61  IPHSEYLTQAKVVTAAAVGVDDSVVLTSAGGAVGYDFLVVATGRECSRPQKREDRLQMFE 120
           IPHSEYLTQAKVVTAAAVGVDDSVVLTSAGGAVGYDFLVVATGRECSRPQKREDRLQMFE
Sbjct: 61  IPHSEYLTQAKVVTAAAVGVDDSVVLTSAGGAVGYDFLVVATGRECSRPQKREDRLQMFE 120

Query: 121 HDKARIXXXXXXXXXXXXPIGVELAAEIVMASPEKRVTLVHGGPRLLMVMGEKASAKALE 180
           HDKARI            PIGVELAAEIVMASPEKRVTLVHGGPRLLMVMGEKASAKALE
Sbjct: 121 HDKARIASAGSVLVVGGGPIGVELAAEIVMASPEKRVTLVHGGPRLLMVMGEKASAKALE 180

Query: 181 WLRSKNVTVLLDQTVDLXXXXXXXNTDDKVFTTSAGETVAADCHFVCTGRPVASGWLRES 240
           WLRSKNVTVLLDQTVDL       NTDDKVFTTSAGETVAADCHFVCTGRPVASGWLRES
Sbjct: 181 WLRSKNVTVLLDQTVDLAAAAAGANTDDKVFTTSAGETVAADCHFVCTGRPVASGWLRES 240

Query: 241 FLGEHVGGDGKVAVDEHLRVGGLRNVFAIGDITDVPEAKQGYLAQRHAMVVSRNLRLLVK 300
           FLGEHVGGDGKVAVDEHLRVGGLRNVFAIGDITDVPEAKQGYLAQRHAMVVSRNLRLLVK
Sbjct: 241 FLGEHVGGDGKVAVDEHLRVGGLRNVFAIGDITDVPEAKQGYLAQRHAMVVSRNLRLLVK 300

Query: 301 AXXXXXXXSSKERKLHRYKASKAAITVTLGRRDALAELPFMTVIGHLPGVIKPRDYFIAR 360
           A       SSKERKLHRYKASKAAITVTLGRRDALAELPFMTVIGHLPGVIKPRDYFIAR
Sbjct: 301 AGGGDGGGSSKERKLHRYKASKAAITVTLGRRDALAELPFMTVIGHLPGVIKPRDYFIAR 360

Query: 361 TRRMMGLRTGARYDQSMFRI 380
           TRRMMGLRTGARYDQSMFRI
Sbjct: 361 TRRMMGLRTGARYDQSMFRI 380



>Os02g0150300 Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
           domain containing protein
          Length = 329

 Score =  330 bits (847), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 161/334 (48%), Positives = 221/334 (66%), Gaps = 12/334 (3%)

Query: 35  DPKEYFEIPWANLRAKMDPAAVARTVIPHSEYLTQAKVVTAAAVGVDDSVVLTSAGGAVG 94
           D K+Y EIPWA LR+ ++P+   R++I H +YLT A +VT++AV + +  VLT+ G ++ 
Sbjct: 7   DRKDYLEIPWAELRSMVEPSFAERSLIYHRDYLTNATIVTSSAVNITEQAVLTADGQSLA 66

Query: 95  YDFLVVATGRECSRPQKREDRLQMFEHDKARIXXXXXXXXXXXXPIGVELAAEIVMASPE 154
           YD+LV+ATG   + P  R +R++ F+ DK +I            P GVELA EI +  PE
Sbjct: 67  YDYLVIATGHALTSPGSRSERIKEFQRDKGKIESSESVLIIGGGPTGVELAGEIAVDYPE 126

Query: 155 KRVTLVHGGPRLLMVMGEKASAKALEWLRSKNVTVLLDQTVDLXXXXXXXNTDDKVFTTS 214
           K+VTLVH G RLL  +G+KAS K L+WL SK V VL  Q++DL       NT +K++ TS
Sbjct: 127 KKVTLVHRGSRLLEFIGDKASKKCLDWLTSKKVDVLFQQSIDL---DSLSNT-EKLYRTS 182

Query: 215 AGETVAADCHFVCTGRPVASGWLRESFLGEHVGGDGKVAVDEHLRVGGLRNVFAIGDITD 274
           AGETV ADCHFVC G+P++S WL ++ L E +   G++ V++ LR+ G  N+FAIGDITD
Sbjct: 183 AGETVTADCHFVCIGKPLSSSWLHDTILKESLDNKGRLMVEKDLRIKGYNNIFAIGDITD 242

Query: 275 VPEAKQGYLAQRHAMVVSRNLRLLVKAXXXXXXXSSKERKLHRYKASKAAITVTLGRRDA 334
           +PE KQGYLA +HA++V++NLRLL+K         S   KL  Y    A   ++LGR + 
Sbjct: 243 IPEIKQGYLAHKHALLVAKNLRLLIKG--------SPNSKLETYSPGFALALISLGRNEG 294

Query: 335 LAELPFMTVIGHLPGVIKPRDYFIARTRRMMGLR 368
           LA+LPF+T+ G LPG IK RD FI RTR+ MGL 
Sbjct: 295 LAQLPFLTLGGCLPGKIKSRDLFIGRTRKQMGLN 328



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.136    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,879,880
Number of extensions: 391752
Number of successful extensions: 836
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 831
Number of HSP's successfully gapped: 2
Length of query: 380
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 277
Effective length of database: 11,657,759
Effective search space: 3229199243
Effective search space used: 3229199243
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)