Os11g0158200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0158200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 368.96 | 0.902 | 3.01 | -0.043 | 0.214 | -0.859 | -1.04 | 1.57 | 0.0191 | 3.88 | 1014 | 4233 | -- | -- |
| 371.58 | 0.898 | 3.01 | -0.13 | 0.226 | -1.34 | -0.73 | -- | 0.0356 | 3.42 | 1016 | 3908 | -- | -- |
| 372.08 | 0.898 | 3 | -0.0451 | 0.207 | -0.839 | -- | 1.49 | 0.0195 | 3.64 | 1014 | 4222 | -- | -- |
| 373.63 | 0.9 | 3 | -0.093 | 0.208 | -1.36 | -- | -- | 0.00474 | 3.54 | 1016 | 3905 | -- | -- |
| 374.44 | 0.901 | 3 | -0.0377 | -- | -0.819 | -- | 1.46 | 0.0238 | -- | 1014 | 4243 | -- | -- |
| 390.51 | 0.926 | 3.03 | -0.31 | 0.175 | -- | -0.794 | -- | -0.121 | 3.66 | -- | -- | -- | -- |
| 392.41 | 0.928 | 3.03 | -0.298 | 0.17 | -- | -- | -- | -0.117 | 3.43 | -- | -- | -- | -- |
| 376.12 | 0.903 | 3.01 | -0.0962 | -- | -1.32 | -- | -- | -0.00459 | -- | 1016 | 3905 | -- | -- |
| 373.87 | 0.901 | 3 | -- | 0.214 | -1.39 | -- | -- | 0.00456 | 3.57 | 1016 | 3905 | -- | -- |
| 394.04 | 0.928 | 3.03 | -0.29 | -- | -- | -- | -- | -0.112 | -- | -- | -- | -- | -- |
| 394.74 | 0.929 | 3.03 | -- | 0.165 | -- | -- | -- | -0.0837 | 3.44 | -- | -- | -- | -- |
| 376.36 | 0.904 | 3.01 | -- | -- | -1.36 | -- | -- | 0.00755 | -- | 1016 | 3905 | -- | -- |
| 396.26 | 0.929 | 3.03 | -- | -- | -- | -- | -- | -0.0802 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 361.67 | temperature | 20 | 270 | < th | dose dependent | rect. | 20 | 2 |
| 7 | 362.15 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 12 |
| 11 | 362.28 | temperature | 20 | 720 | < th | dose dependent | rect. | 8 | 13 |
| 12 | 362.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 19 | 362.68 | temperature | 25 | 720 | < th | dose dependent | sin | 20 | NA |
| 77 | 363.90 | temperature | 20 | 270 | < th | dose independent | rect. | 20 | 1 |
| 78 | 363.94 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 85 | 364.03 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 88 | 364.05 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 98 | 364.08 | temperature | 20 | 270 | < th | dose independent | rect. | 19 | 3 |
| 111 | 364.19 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 181 | 364.77 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 213 | 364.96 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 249 | 365.29 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 276 | 365.51 | temperature | 20 | 10 | < th | dose dependent | rect. | 12 | 13 |
| 292 | 365.64 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 334 | 365.83 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 366 | 366.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 8 |
| 428 | 366.25 | temperature | 10 | 720 | > th | dose dependent | sin | 19 | NA |
| 435 | 366.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 15 |
| 439 | 366.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 485 | 366.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 13 |
| 514 | 366.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 11 |
| 515 | 366.64 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 20 |
| 538 | 366.76 | temperature | 10 | 270 | > th | dose dependent | sin | 15 | NA |
| 545 | 366.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 10 |
| 567 | 366.90 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 6 | 7 |
| 570 | 366.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 18 |
| 587 | 366.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 589 | 366.98 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 594 | 367.00 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 606 | 367.06 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 623 | 367.09 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 667 | 367.19 | temperature | 20 | 720 | < th | dose independent | rect. | 12 | 9 |
| 675 | 367.21 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 16 | 13 |
| 693 | 367.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 15 |
| 721 | 367.41 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 6 | 8 |
| 747 | 367.49 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 6 | 8 |
| 890 | 367.86 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 24 | 14 |
| 922 | 367.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 928 | 367.99 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 9 |
| 949 | 368.03 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 981 | 368.07 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |