BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0563500 Os10g0563500|AK101930
         (799 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0563500  Protein kinase-like domain containing protein      1629   0.0  

>Os10g0563500 Protein kinase-like domain containing protein
          Length = 799

 Score = 1629 bits (4219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 787/799 (98%), Positives = 787/799 (98%)

Query: 1   MDSKAAGSSEIERAWHLLTVVIRLGRPAAASDVARFATADDVERLCRIPGSPLRLSGGVV 60
           MDSKAAGSSEIERAWHLLTVVIRLGRPAAASDVARFATADDVERLCRIPGSPLRLSGGVV
Sbjct: 1   MDSKAAGSSEIERAWHLLTVVIRLGRPAAASDVARFATADDVERLCRIPGSPLRLSGGVV 60

Query: 61  AASETAFVAFLRYVGLDVPPPRVSPRAPDDVMRWLRRRVPVTYERKRKASDAGRFVARKR 120
           AASETAFVAFLRYVGLDVPPPRVSPRAPDDVMRWLRRRVPVTYERKRKASDAGRFVARKR
Sbjct: 61  AASETAFVAFLRYVGLDVPPPRVSPRAPDDVMRWLRRRVPVTYERKRKASDAGRFVARKR 120

Query: 121 LLAAPDADLPEHELRQSQQLIVQSCAPVATGEVHQEATQELQDRLPSLNIFTAQRSFEVS 180
           LLAAPDADLPEHELRQSQQLIVQSCAPVATGEVHQEATQELQDRLPSLNIFTAQRSFEVS
Sbjct: 121 LLAAPDADLPEHELRQSQQLIVQSCAPVATGEVHQEATQELQDRLPSLNIFTAQRSFEVS 180

Query: 181 IGSNVFSDIEISMPSLPSKIDQFIGGNDGSVLVSMASALVPKEVTDMSGCINIFHATVDR 240
           IGSNVFSDIEISMPSLPSKIDQFIGGNDGSVLVSMASALVPKEVTDMSGCINIFHATVDR
Sbjct: 181 IGSNVFSDIEISMPSLPSKIDQFIGGNDGSVLVSMASALVPKEVTDMSGCINIFHATVDR 240

Query: 241 ESTRIGEPEGSASLCCSRVEDREELEKESTLLTMAVGLAVGKKNGIEQDLNLRPSSPRNC 300
           ESTRIGEPEGSASLCCSRVEDREELEKESTLLTMAVGLAVGKKNGIEQDLNLRPSSPRNC
Sbjct: 241 ESTRIGEPEGSASLCCSRVEDREELEKESTLLTMAVGLAVGKKNGIEQDLNLRPSSPRNC 300

Query: 301 STKATDDMETFDVISKEAEALQYCSPNAQYPQKILTCGQDSDALVVNAHVAIHENKIEDI 360
           STKATDDMETFDVISKEAEALQYCSPNAQYPQKILTCGQDSDALVVNAHVAIHENKIEDI
Sbjct: 301 STKATDDMETFDVISKEAEALQYCSPNAQYPQKILTCGQDSDALVVNAHVAIHENKIEDI 360

Query: 361 TFQPPEGTKTEAIVHEMVHETMGSLCQPSSNTKVEHAVLPLQAPTYGCISNENLNIAAEN 420
           TFQPPEGTKTEAIVHEMVHETMGSLCQPSSNTKVEHAVLPLQAPTYGCISNENLNIAAEN
Sbjct: 361 TFQPPEGTKTEAIVHEMVHETMGSLCQPSSNTKVEHAVLPLQAPTYGCISNENLNIAAEN 420

Query: 421 RASTHQNHVEPSTQNEVAVRLSKKEQDRKIMKQRDKGKKKEALPKEDKDQVAAKVQKGHT 480
           RASTHQNHVEPSTQNEVAVRLSKKEQDRKIMKQRDKGKKKEALPKEDKDQVAAKVQKGHT
Sbjct: 421 RASTHQNHVEPSTQNEVAVRLSKKEQDRKIMKQRDKGKKKEALPKEDKDQVAAKVQKGHT 480

Query: 481 EPKPLPNFKNFXXXXXXXXXXXXTVYRARRKSDGRLFAIKCPHANAHSHHVYNEQKMLER 540
           EPKPLPNFKNF            TVYRARRKSDGRLFAIKCPHANAHSHHVYNEQKMLER
Sbjct: 481 EPKPLPNFKNFEIEEEEGSGGYGTVYRARRKSDGRLFAIKCPHANAHSHHVYNEQKMLER 540

Query: 541 FGGKNFVIKYECSLRSGDLECFVLEHVEHDRPENLRKEIGLFDLRWYGFCLFKALASLHK 600
           FGGKNFVIKYECSLRSGDLECFVLEHVEHDRPENLRKEIGLFDLRWYGFCLFKALASLHK
Sbjct: 541 FGGKNFVIKYECSLRSGDLECFVLEHVEHDRPENLRKEIGLFDLRWYGFCLFKALASLHK 600

Query: 601 QGIVHRDVKPGNFLFSRKLAKGYLIDFNLANDLHQKFFRNSKSETISRGKDTISQPALKS 660
           QGIVHRDVKPGNFLFSRKLAKGYLIDFNLANDLHQKFFRNSKSETISRGKDTISQPALKS
Sbjct: 601 QGIVHRDVKPGNFLFSRKLAKGYLIDFNLANDLHQKFFRNSKSETISRGKDTISQPALKS 660

Query: 661 TPVVQAKEPVADSKQLLGSKRKRSNRSPVGSAPKNDNKSRHGIQAADVSGVTSAKDPTST 720
           TPVVQAKEPVADSKQLLGSKRKRSNRSPVGSAPKNDNKSRHGIQAADVSGVTSAKDPTST
Sbjct: 661 TPVVQAKEPVADSKQLLGSKRKRSNRSPVGSAPKNDNKSRHGIQAADVSGVTSAKDPTST 720

Query: 721 KTSLDRLKQPMPYKGRKELMNFLHDAMQSPDKNTSTAPVSQRKRVAAPLGNVDQKLFILT 780
           KTSLDRLKQPMPYKGRKELMNFLHDAMQSPDKNTSTAPVSQRKRVAAPLGNVDQKLFILT
Sbjct: 721 KTSLDRLKQPMPYKGRKELMNFLHDAMQSPDKNTSTAPVSQRKRVAAPLGNVDQKLFILT 780

Query: 781 PMPLCSGGSAIAGSGMLNS 799
           PMPLCSGGSAIAGSGMLNS
Sbjct: 781 PMPLCSGGSAIAGSGMLNS 799



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.315    0.131    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 27,811,427
Number of extensions: 1236902
Number of successful extensions: 4997
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4999
Number of HSP's successfully gapped: 1
Length of query: 799
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 690
Effective length of database: 11,344,475
Effective search space: 7827687750
Effective search space used: 7827687750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)