BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0539700 Os10g0539700|AK120628
         (832 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0539700  Conserved hypothetical protein                     1373   0.0  
Os09g0553900  Conserved hypothetical protein                      524   e-148

>Os10g0539700 Conserved hypothetical protein
          Length = 832

 Score = 1373 bits (3555), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/807 (87%), Positives = 704/807 (87%)

Query: 14  LDLGEYLDRPDAIHRRAASVAIVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGG 73
           LDLGEYLDRPDAIHRRAASVAIVR                                PAGG
Sbjct: 14  LDLGEYLDRPDAIHRRAASVAIVRSGGGDGPRIVDGGRDDRRARSSRRLSLSSWRRPAGG 73

Query: 74  ETSVESRRYGFTAAAAAEVGGKTRAAAIWEWKPVRVLSRIGKRRCGCLLSVEVAGVRGVP 133
           ETSVESRRYGFTAAAAAEVGGKTRAAAIWEWKPVRVLSRIGKRRCGCLLSVEVAGVRGVP
Sbjct: 74  ETSVESRRYGFTAAAAAEVGGKTRAAAIWEWKPVRVLSRIGKRRCGCLLSVEVAGVRGVP 133

Query: 134 ASMDGLRLAVTVRKAETKDGAVQTMPATVRGGCADFVETLFVRCNIYFAGGAGTGKPLKL 193
           ASMDGLRLAVTVRKAETKDGAVQTMPATVRGGCADFVETLFVRCNIYFAGGAGTGKPLKL
Sbjct: 134 ASMDGLRLAVTVRKAETKDGAVQTMPATVRGGCADFVETLFVRCNIYFAGGAGTGKPLKL 193

Query: 194 EPRRFVVSVVPAEAPGVRLGAHAVDVSSLVLDSLQKSSEGRRVRWFDTAVTLSGKATGGE 253
           EPRRFVVSVVPAEAPGVRLGAHAVDVSSLVLDSLQKSSEGRRVRWFDTAVTLSGKATGGE
Sbjct: 194 EPRRFVVSVVPAEAPGVRLGAHAVDVSSLVLDSLQKSSEGRRVRWFDTAVTLSGKATGGE 253

Query: 254 LLLKLGFQLMDDAGLCLYTQAATEKVDVVDDVSPALARAHNKNSFSVARTSGPKLSASDA 313
           LLLKLGFQLMDDAGLCLYTQAATEKVDVVDDVSPALARAHNKNSFSVARTSGPKLSASDA
Sbjct: 254 LLLKLGFQLMDDAGLCLYTQAATEKVDVVDDVSPALARAHNKNSFSVARTSGPKLSASDA 313

Query: 314 AISPSMRAYKQLIDRLSVDEHGDPVTSLIPRKLADDELSGDVGLPEYEVVDKGVETVKEV 373
           AISPSMRAYKQLIDRLSVDEHGDPVTSLIPRKLADDELSGDVGLPEYEVVDKGVETVKEV
Sbjct: 314 AISPSMRAYKQLIDRLSVDEHGDPVTSLIPRKLADDELSGDVGLPEYEVVDKGVETVKEV 373

Query: 374 VHYHAHRDVLKELDSIAEQIEAIEALMTNGGXXXXXXXXXVDQKQCLDADEEMVTVEFLR 433
           VHYHAHRDVLKELDSIAEQIEAIEALMTNGG         VDQKQCLDADEEMVTVEFLR
Sbjct: 374 VHYHAHRDVLKELDSIAEQIEAIEALMTNGGKKSPPSPKKVDQKQCLDADEEMVTVEFLR 433

Query: 434 KLEVVDDKGRKLKQPMTPRSESEKKXXXXXXXXXXDLGPGLGTAVQTRDGGFLVSMNPFD 493
           KLEVVDDKGRKLKQPMTPRSESEKK          DLGPGLGTAVQTRDGGFLVSMNPFD
Sbjct: 434 KLEVVDDKGRKLKQPMTPRSESEKKAAAAAPPVVPDLGPGLGTAVQTRDGGFLVSMNPFD 493

Query: 494 LPLEKGDAPPKLAMQVSRPFVLPSSMAATGFDVLQKMAAAGGADEVRDKVARLGGMDNLT 553
           LPLEKGDAPPKLAMQVSRPFVLPSSMAATGFDVLQKMAAAGGADEVRDKVARLGGMDNLT
Sbjct: 494 LPLEKGDAPPKLAMQVSRPFVLPSSMAATGFDVLQKMAAAGGADEVRDKVARLGGMDNLT 553

Query: 554 GKTPEQVGFEGIAEAVIGGRRTEGXXXXXXXXXXXXXKLAAAVSDGRSERVATGIWTAAD 613
           GKTPEQVGFEGIAEAVIGGRRTEG             KLAAAVSDGRSERVATGIWTAAD
Sbjct: 554 GKTPEQVGFEGIAEAVIGGRRTEGASSSAARSVRLVRKLAAAVSDGRSERVATGIWTAAD 613

Query: 614 DPETLEEVIAFSLQKLEAMAVDALMIQAEMADEDAPFEVAPAAGDATTVFDALVSPDEWS 673
           DPETLEEVIAFSLQKLEAMAVDALMIQAEMADEDAPFEVAPAAGDATTVFDALVSPDEWS
Sbjct: 614 DPETLEEVIAFSLQKLEAMAVDALMIQAEMADEDAPFEVAPAAGDATTVFDALVSPDEWS 673

Query: 674 ESRGSDGRVTVVAAIQLRDPSRRYEAVGAPMVAVVQSARLLGAAGNSGGRFKVRSLHVGG 733
           ESRGSDGRVTVVAAIQLRDPSRRYEAVGAPMVAVVQSARLLGAAGNSGGRFKVRSLHVGG
Sbjct: 674 ESRGSDGRVTVVAAIQLRDPSRRYEAVGAPMVAVVQSARLLGAAGNSGGRFKVRSLHVGG 733

Query: 734 VQLRCPVXXXXXXXXXXXXXERQKLTAMQWALAHXXXXXXXXXXXXXXXXXXXXXXXXXX 793
           VQLRCPV             ERQKLTAMQWALAH                          
Sbjct: 734 VQLRCPVGGGAGGGRASWGAERQKLTAMQWALAHGPARAAGRRARTPTTTTTPSSQARQR 793

Query: 794 PDVVWSLSSRVLAGMWLKTVRNPDVRV 820
           PDVVWSLSSRVLAGMWLKTVRNPDVRV
Sbjct: 794 PDVVWSLSSRVLAGMWLKTVRNPDVRV 820



>Os09g0553900 Conserved hypothetical protein
          Length = 883

 Score =  524 bits (1349), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 322/786 (40%), Positives = 441/786 (56%), Gaps = 74/786 (9%)

Query: 89  AAEVGGKTRAAAIWEWKPVRVLSRIGKRRCGCLLSVEVAGVRGVPASMDGLRLAVTVRKA 148
           AA V G+ +   IW WKP+R LS IG  R GCL SVEV   +G+P SM+GLRLAV VRK 
Sbjct: 115 AAAVAGEKKG--IWGWKPIRALSHIGMNRLGCLFSVEVVAAQGLPPSMNGLRLAVAVRKK 172

Query: 149 ETKDGAVQTMPATVRGGCADFVETLFVRCNIYFAGGAGTGKPLKLEPRRFVVSVVPAEAP 208
           ET+DGA+QTMP+ V+ G ADF ETLFVRC++Y +GGAGTGKPL+ EPR F++S V  EAP
Sbjct: 173 ETRDGAMQTMPSRVQQGAADFEETLFVRCHLYCSGGAGTGKPLRFEPRPFLLSAVAVEAP 232

Query: 209 GVRLGAHAVDVSSLVLDSLQKSSEGRRVRWFDTAVTLSGKATGGELLLKLGFQLMDDAGL 268
            +  G  AVD+S LV +S  KS +G RVR +D A+ L+GKA GGEL++KL FQ+MDD G+
Sbjct: 233 ELDFGRSAVDLSLLVKESTDKSQQGERVRQWDMALPLAGKAKGGELVVKLSFQIMDDGGV 292

Query: 269 CLYTQA-ATEKVDVVDDVSPALARAHNKNSFSVART----SGPKLSASDAAISPSMRAYK 323
            L+ Q  A  K++     S   AR  +K SFS+       S PKL+ +  + SP +R   
Sbjct: 293 GLFNQTGAATKINSSSSSSSLFARKQSKLSFSITSPKVSRSEPKLTPTKGSPSPDLRG-- 350

Query: 324 QLIDRLSVDEHGDP------VTSLIPRKLADDELSGDVGLPEYEVVDKGVE--------- 368
             ID   +DE   P           P     +E   D   PE++VVDKGVE         
Sbjct: 351 --IDDFKLDEPSLPSLAEAKQEQKEPEPPEPEEKVDDSEFPEFDVVDKGVEGQEENVVEA 408

Query: 369 --------------------------TVKEVVHYHAHRDVLKELDSIAEQIEAIEALMTN 402
                                      VKEVVH  AH   + EL++I  QI+A+E++M  
Sbjct: 409 KGAAEEEAKEEKAAAEEAPTSAAGDEVVKEVVHDSAHAWRINELEAITNQIKALESMMLG 468

Query: 403 GGXXXXXXXXXVD-QKQCLDADEEMVTVEFLRKLEVVDDKGRKLKQPMTPRSESEKKX-- 459
                       D     LD DEE VT EFL+ LE  D K    K   + +S +++    
Sbjct: 469 DAPAAGKTEDTRDGDAAALDTDEEEVTREFLQLLEQGDGKATLAKSVSSLKSGAKRDTGG 528

Query: 460 --XXXXXXXXXDLGPGLGTAVQTRDGGFLVSMNPFDLPLEKGDAPPKLAMQVSRPFVLPS 517
                      DLG GLG  VQTRDGG+L + NPFD+P+E+ + P KLAMQ+S+P +L  
Sbjct: 529 AADASAACYISDLGKGLGPIVQTRDGGYLAATNPFDIPVERKELP-KLAMQLSKPVILRD 587

Query: 518 SMAATGFDVLQKMAAAGGADEVRDKVARLGGMDNLTGKTPEQVGFEGIAEAVIGGRRTEG 577
                G   L +   AGG + + +K+A L G D + GKT EQ+ FEG+A A+I  R    
Sbjct: 588 QRLPGGGAELFQQLCAGGCEALFEKLAALVGTDEVVGKTAEQIAFEGMATAIISARSAAL 647

Query: 578 XXXXXXXXXXXXXK-LAAAVSDGRSERVATGIWTAADDPETLEEVIAFSLQKLEAMAVDA 636
                        + +++A+SDGR ER+ TGIW A + P T++E++AFSLQK+EAMA+ A
Sbjct: 648 GASSSAAQTVSLLRTMSSAMSDGRQERIDTGIWNAHETPVTVDEILAFSLQKIEAMAIKA 707

Query: 637 LMIQAEMADEDAPFEVAPAAGD--ATTVFDALVSPDEWSESRGSDGRVTVVAAIQLRDPS 694
           L +QA+MADE +PF+V+PA+       + DA V P++W+ +      VT++   QLRDP 
Sbjct: 708 LKVQADMADEQSPFDVSPASDKRGGGHLLDAAVPPEDWALACVGADTVTMLLVAQLRDPL 767

Query: 695 RRYEAVGAPMVAVVQSARLLGAAGNSGGRFKVRSLHVGGVQLRCPVXXXXXXXXXXXXXE 754
           RRYEAVGAP + ++Q+ R+ G   +   +FKV ++HVGG++L+                E
Sbjct: 768 RRYEAVGAPSIVIIQAVRIAGNDDDDEPKFKVANMHVGGLRLKS------ADRRNVWDGE 821

Query: 755 RQKLTAMQWALAHXXXXXXXXXXXXXXXXXXXXXXXXXXPDVVWSLSSRVLAGMWLKTVR 814
           +Q+LTAM W +A+                           DV+WS+SSRV+A MWLK +R
Sbjct: 822 KQRLTAMHWLVAYGLGKAGRKGRTAAAAGKSGH-------DVLWSMSSRVMADMWLKPLR 874

Query: 815 NPDVRV 820
           NPDV++
Sbjct: 875 NPDVKI 880



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.133    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,983,656
Number of extensions: 1012630
Number of successful extensions: 2627
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2617
Number of HSP's successfully gapped: 3
Length of query: 832
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 723
Effective length of database: 11,344,475
Effective search space: 8202055425
Effective search space used: 8202055425
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)