BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0508400 Os10g0508400|AK066207
(390 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0508400 Similar to Methionine aminopeptidase-like protein 811 0.0
Os02g0761700 Peptidase M24 family protein 272 3e-73
Os04g0610500 Peptidase M24A, methionine aminopeptidase, sub... 270 2e-72
Os07g0510100 Similar to Methionine aminopeptidase-like protein 246 3e-65
Os07g0434700 Peptidase M24 family protein 144 2e-34
Os07g0147000 114 1e-25
>Os10g0508400 Similar to Methionine aminopeptidase-like protein
Length = 390
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MEKGGAESSIACARCGKPASLQCPKCAQLKLLREGAAFCTQDCFKEAWSSHKSVHIKLDA 60
MEKGGAESSIACARCGKPASLQCPKCAQLKLLREGAAFCTQDCFKEAWSSHKSVHIKLDA
Sbjct: 1 MEKGGAESSIACARCGKPASLQCPKCAQLKLLREGAAFCTQDCFKEAWSSHKSVHIKLDA 60
Query: 61 LTLQQTPEGWQYCLKKGRTRTSQLPRFDWTGPLRPYPISKMCVVPDKIEKPDWALDGTPK 120
LTLQQTPEGWQYCLKKGRTRTSQLPRFDWTGPLRPYPISKMCVVPDKIEKPDWALDGTPK
Sbjct: 61 LTLQQTPEGWQYCLKKGRTRTSQLPRFDWTGPLRPYPISKMCVVPDKIEKPDWALDGTPK 120
Query: 121 IEPDSDLQKRVEIKTPEQIERMRETCRIAREVLDAAARIIKPGITTDEIDRVVHEETVAR 180
IEPDSDLQKRVEIKTPEQIERMRETCRIAREVLDAAARIIKPGITTDEIDRVVHEETVAR
Sbjct: 121 IEPDSDLQKRVEIKTPEQIERMRETCRIAREVLDAAARIIKPGITTDEIDRVVHEETVAR 180
Query: 181 GGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGVHGDLNETYF 240
GGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGVHGDLNETYF
Sbjct: 181 GGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGVHGDLNETYF 240
Query: 241 VGNVDEASKQLVRCTYECLDKAIAIVKPGVRFREVGEIINRHASMSGLSVVKSYCGHGIG 300
VGNVDEASKQLVRCTYECLDKAIAIVKPGVRFREVGEIINRHASMSGLSVVKSYCGHGIG
Sbjct: 241 VGNVDEASKQLVRCTYECLDKAIAIVKPGVRFREVGEIINRHASMSGLSVVKSYCGHGIG 300
Query: 301 ELFHCAPNIPHYSRNKAVGIMKAGQTFTIEPMINTGVWHDRLWPDEWTAVTADGKRSAQF 360
ELFHCAPNIPHYSRNKAVGIMKAGQTFTIEPMINTGVWHDRLWPDEWTAVTADGKRSAQF
Sbjct: 301 ELFHCAPNIPHYSRNKAVGIMKAGQTFTIEPMINTGVWHDRLWPDEWTAVTADGKRSAQF 360
Query: 361 EHTLLVTETGVEVLTARLPSSPDVFPWLKP 390
EHTLLVTETGVEVLTARLPSSPDVFPWLKP
Sbjct: 361 EHTLLVTETGVEVLTARLPSSPDVFPWLKP 390
>Os02g0761700 Peptidase M24 family protein
Length = 370
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/307 (46%), Positives = 183/307 (59%), Gaps = 30/307 (9%)
Query: 93 LRPYPISKMCVVPDKIEKPDWALDGTPKIEPDSDLQKRVEIKTPEQIERMRETCRIAREV 152
LRP +S VP I++P + + P L EI IE MR + ++A +V
Sbjct: 68 LRPGKVSPRLSVPKHIQRPPYV---NARQRPG--LHNGPEIHDERGIECMRASGKLAAQV 122
Query: 153 LDAAARIIKPGITTDEIDRVVHEETVARGGYPSPLNYHFFPKSCCTSVNEVICHGIPDAR 212
L A +++PGITTDEID+ VH+ V G YPSPL Y FPKS CTSVNE ICHGIPD+R
Sbjct: 123 LKFAGTLVEPGITTDEIDKAVHQMIVDNGAYPSPLGYCGFPKSVCTSVNECICHGIPDSR 182
Query: 213 KLEDGDIVNVDVTVYYK------------------------GVHGDLNETYFVGNVDEAS 248
LEDGDI+N+DVTVY G HGD + T+ GNVD+ +
Sbjct: 183 PLEDGDIINIDVTVYLNRVFLCISSLYLHKCQSMTMVAGQLGYHGDTSATFLCGNVDDKA 242
Query: 249 KQLVRCTYECLDKAIAIVKPGVRFREVGEIINRHASMSGLSVVKSYCGHGIGELFHCAPN 308
K+LV+ T ECLDKAI+I PGV + +G I HA VV+ + GHG+G++FH P
Sbjct: 243 KKLVQVTRECLDKAISICAPGVEIKRIGRTIQDHADKFKFGVVRQFVGHGVGQVFHAEPV 302
Query: 309 IPHYSRNKAVGIMKAGQTFTIEPMINTGVWHDRLWPDEWTAVTADGKRSAQFEHTLLVTE 368
+ H+ RN G M QTFTIEPM+ G + +W D+WTAVT DG SAQFEHT+L+TE
Sbjct: 303 VLHF-RNNEWGRMTLNQTFTIEPMLTVGSVNPVIWSDDWTAVTEDGSLSAQFEHTILITE 361
Query: 369 TGVEVLT 375
G E+LT
Sbjct: 362 DGAEILT 368
>Os04g0610500 Peptidase M24A, methionine aminopeptidase, subfamily 1 protein
Length = 340
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/308 (44%), Positives = 188/308 (61%), Gaps = 7/308 (2%)
Query: 68 EGWQYCLKKGRTRTSQLPRFDWTGPLRPYPISKMCVVPDKIEKPDWALDGTPKIEPDSDL 127
EG + + R + S L + PL +S VP I +P + + S++
Sbjct: 38 EGLEKANPRSRGKQS-LEQVKKRAPLIRGTVSPPLPVPGHITQPPYVGK-----KDASEI 91
Query: 128 QKRVEIKTPEQIERMRETCRIAREVLDAAARIIKPGITTDEIDRVVHEETVARGGYPSPL 187
+++ I M+ C +A VL+ A ++KP +TTDEID+ VH+ + G YPSPL
Sbjct: 92 ASEIQMHDKVSIIHMKAACELAARVLEYAGTLVKPSVTTDEIDKAVHKMIIDAGAYPSPL 151
Query: 188 NYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEA 247
Y FPKS CTSVNE ICHGIPD+R+L+DGDI+N+DVTVY G HGD ++T+ G VDEA
Sbjct: 152 GYGGFPKSVCTSVNECICHGIPDSRELQDGDIINIDVTVYLNGYHGDTSKTFLCGEVDEA 211
Query: 248 SKQLVRCTYECLDKAIAIVKPGVRFREVGEIINRHASMSGLSVVKSYCGHGIGELFHCAP 307
SK+LV+ T EC+ +AI+ K G +++G I+ HA G VV + GHG+G +FH P
Sbjct: 212 SKRLVKVTEECMLRAISACKHGTSLKKIGRRISEHAERHGFGVVDRFVGHGVGRIFHSEP 271
Query: 308 NIPHYSRNKAVGIMKAGQTFTIEPMINTGVWHDRLWPDEWTAVTADGKRSAQFEHTLLVT 367
I H RN G M GQTFTIEP ++ G +W D WTAVT DG +AQFEHT+L+T
Sbjct: 272 MIYH-QRNNMPGQMVEGQTFTIEPALSMGSIDCDMWDDGWTAVTTDGSLAAQFEHTILIT 330
Query: 368 ETGVEVLT 375
+TG E+LT
Sbjct: 331 KTGAEILT 338
>Os07g0510100 Similar to Methionine aminopeptidase-like protein
Length = 357
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 173/284 (60%), Gaps = 6/284 (2%)
Query: 92 PLRPYPISKMCVVPDKIEKPDWALDGTPKIEPDSDLQKRVEIKTPEQIERMRETCRIARE 151
PLR IS VP+ I +P + P+ +L +I + E I MR C++A
Sbjct: 78 PLRRGKISPQLPVPEHIPRPSYVGSNRPQ-----ELSSVRQIHSAEGIAGMRAACKLAAR 132
Query: 152 VLDAAARIIKPGITTDEIDRVVHEETVARGGYPSPLNYHFFPKSCCTSVNEVICHGIPDA 211
LD A +IKP +TT+EIDR VH + G YPS L Y FPKS CTS+NE +CHG+PD+
Sbjct: 133 ALDFAGTLIKPSVTTNEIDREVHNMIIEAGAYPSQLGYGGFPKSICTSLNECVCHGVPDS 192
Query: 212 RKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEASKQLVRCTYECLDKAIAIVKPGVR 271
+L+ GDI+NVDV V+ G HG + T+ G VD++ + ++ ECL+K I + + GV
Sbjct: 193 TQLQTGDIMNVDVNVFLNGYHGGASRTFVCGEVDDSIRHFLKAAEECLEKGITVCRDGVN 252
Query: 272 FREVGEIINRHASMSGLSVVKSYCGHGIGELFHCAPNIPHYSRNKAVGIMKAGQTFTIEP 331
++++G+ I++ A G VV + GHGIG ++H P I H++ + + G M GQTFTIEP
Sbjct: 253 YKKIGKKISKLAYFYGYYVVDRFVGHGIGPIWHSEPLILHHANDNS-GRMVEGQTFTIEP 311
Query: 332 MINTGVWHDRLWPDEWTAVTADGKRSAQFEHTLLVTETGVEVLT 375
++ W D WT VTADG +AQF+HT+LVT TG E+LT
Sbjct: 312 ILTMEKAETVTWEDGWTTVTADGSWAAQFKHTVLVTRTGAEILT 355
>Os07g0434700 Peptidase M24 family protein
Length = 126
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 80/112 (71%)
Query: 142 MRETCRIAREVLDAAARIIKPGITTDEIDRVVHEETVARGGYPSPLNYHFFPKSCCTSVN 201
MR C + VL+ A ++KP TTDEIDR VH+ + G YPSPL Y FPKS CTSVN
Sbjct: 1 MRAACELTARVLEYAGTLVKPLATTDEIDRAVHQMIIDAGAYPSPLGYGGFPKSVCTSVN 60
Query: 202 EVICHGIPDARKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEASKQLVR 253
E ICHGIPD+R L++GDI+N+DVTVY G HGD + TY G VDE++ QLV+
Sbjct: 61 ECICHGIPDSRVLQNGDIINIDVTVYLNGYHGDTSRTYLCGEVDESTMQLVK 112
>Os07g0147000
Length = 107
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/54 (100%), Positives = 54/54 (100%)
Query: 212 RKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEASKQLVRCTYECLDKAIAI 265
RKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEASKQLVRCTYECLDKAIAI
Sbjct: 9 RKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEASKQLVRCTYECLDKAIAI 62
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,549,155
Number of extensions: 625840
Number of successful extensions: 1432
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1425
Number of HSP's successfully gapped: 6
Length of query: 390
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 287
Effective length of database: 11,657,759
Effective search space: 3345776833
Effective search space used: 3345776833
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)