Os10g0508400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Methionine aminopeptidase-like protein.
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Os10g0508400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Methionine aminopeptidase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.87 | 0.261 | 10.8 | -0.204 | 0.333 | 0.741 | 0.155 | 0.151 | 0.0312 | 19.5 | 21.34 | 1597 | -- | -- |
| 30.91 | 0.259 | 10.8 | -0.217 | 0.337 | 0.723 | 0.219 | -- | 0.0297 | 19.5 | 21.35 | 1570 | -- | -- |
| 30.89 | 0.259 | 10.8 | -0.203 | 0.335 | 0.744 | -- | 0.163 | 0.0321 | 19.4 | 21.35 | 1570 | -- | -- |
| 30.95 | 0.259 | 10.8 | -0.235 | 0.339 | 0.731 | -- | -- | 0.0272 | 19.4 | 21.35 | 1570 | -- | -- |
| 35.61 | 0.278 | 10.8 | -0.266 | -- | 0.738 | -- | 0.0563 | 0.019 | -- | 21.31 | 2088 | -- | -- |
| 45.67 | 0.317 | 10.7 | 0.0693 | 0.333 | -- | 0.19 | -- | 0.226 | 19.5 | -- | -- | -- | -- |
| 45.77 | 0.317 | 10.7 | 0.065 | 0.333 | -- | -- | -- | 0.226 | 19.5 | -- | -- | -- | -- |
| 35.56 | 0.278 | 10.8 | -0.292 | -- | 0.751 | -- | -- | -0.00456 | -- | 21.5 | 2134 | -- | -- |
| 31.81 | 0.263 | 10.8 | -- | 0.341 | 0.603 | -- | -- | 0.0616 | 19.1 | 22.3 | 1505 | -- | -- |
| 51.7 | 0.336 | 10.7 | 0.0599 | -- | -- | -- | -- | 0.221 | -- | -- | -- | -- | -- |
| 45.88 | 0.317 | 10.7 | -- | 0.332 | -- | -- | -- | 0.219 | 19.5 | -- | -- | -- | -- |
| 36.76 | 0.282 | 10.8 | -- | -- | 0.554 | -- | -- | 0.0547 | -- | 22.1 | 724 | -- | -- |
| 51.79 | 0.336 | 10.7 | -- | -- | -- | -- | -- | 0.214 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 11 | 30.97 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 25 | 31.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 28 | 31.28 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 38 | 31.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 45 | 31.39 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 46 | 31.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 48 | 31.41 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 50 | 31.41 | temperature | 20 | 4320 | > th | dose independent | rect. | 15 | 9 |
| 52 | 31.41 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 58 | 31.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 74 | 31.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 15 | 9 |
| 94 | 31.58 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 125 | 31.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 142 | 31.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 156 | 31.71 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 205 | 31.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 237 | 31.86 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 257 | 31.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 332 | 32.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 339 | 32.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 387 | 32.07 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 433 | 32.13 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 451 | 32.15 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 454 | 32.15 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 475 | 32.16 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 508 | 32.19 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 519 | 32.19 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 570 | 32.22 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 683 | 32.31 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |