BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0494200 Os10g0494200|Os10g0494200
         (450 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0494200  N-acetyl-gamma-glutamyl-phosphate reductase do...   936   0.0  
Os03g0617900  N-acetyl-gamma-glutamyl-phosphate reductase do...   669   0.0  

>Os10g0494200 N-acetyl-gamma-glutamyl-phosphate reductase domain containing
           protein
          Length = 450

 Score =  936 bits (2418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/450 (100%), Positives = 450/450 (100%)

Query: 1   MLINFLGSVWLQLTSSAEFAEKGVCGLNLKSCSGFMLKTTPKVGCPSLRVRASVSSPQKL 60
           MLINFLGSVWLQLTSSAEFAEKGVCGLNLKSCSGFMLKTTPKVGCPSLRVRASVSSPQKL
Sbjct: 1   MLINFLGSVWLQLTSSAEFAEKGVCGLNLKSCSGFMLKTTPKVGCPSLRVRASVSSPQKL 60

Query: 61  YSSKTTQVKSGEEVQIAVLGASGYTGAEIVRLLANHPQFHIKVMTADRKASEQFGSVFPH 120
           YSSKTTQVKSGEEVQIAVLGASGYTGAEIVRLLANHPQFHIKVMTADRKASEQFGSVFPH
Sbjct: 61  YSSKTTQVKSGEEVQIAVLGASGYTGAEIVRLLANHPQFHIKVMTADRKASEQFGSVFPH 120

Query: 121 LITQDLPNLVAIKDADFSNVDAVFCCLPHGTTQEIIKGLPKQLKIVDLSADFRLRDINEY 180
           LITQDLPNLVAIKDADFSNVDAVFCCLPHGTTQEIIKGLPKQLKIVDLSADFRLRDINEY
Sbjct: 121 LITQDLPNLVAIKDADFSNVDAVFCCLPHGTTQEIIKGLPKQLKIVDLSADFRLRDINEY 180

Query: 181 AEWYGHAHRAPELQQEAVYGLTEVLRDEIRNARLVANPGCYPTSIQLPLVPLIKAKLIKL 240
           AEWYGHAHRAPELQQEAVYGLTEVLRDEIRNARLVANPGCYPTSIQLPLVPLIKAKLIKL
Sbjct: 181 AEWYGHAHRAPELQQEAVYGLTEVLRDEIRNARLVANPGCYPTSIQLPLVPLIKAKLIKL 240

Query: 241 SNIIIDAKSGSIKWLQNVYLYLAICPPSAFKLALLTHCNKTVLAPEIEQGLSEAAKSKVT 300
           SNIIIDAKSGSIKWLQNVYLYLAICPPSAFKLALLTHCNKTVLAPEIEQGLSEAAKSKVT
Sbjct: 241 SNIIIDAKSGSIKWLQNVYLYLAICPPSAFKLALLTHCNKTVLAPEIEQGLSEAAKSKVT 300

Query: 301 ISFTPNLICMKRGMQSTMFVEMAPGVTAGDLYQHLKSTYEGEEFVKLLHGSTVPHTRHVV 360
           ISFTPNLICMKRGMQSTMFVEMAPGVTAGDLYQHLKSTYEGEEFVKLLHGSTVPHTRHVV
Sbjct: 301 ISFTPNLICMKRGMQSTMFVEMAPGVTAGDLYQHLKSTYEGEEFVKLLHGSTVPHTRHVV 360

Query: 361 GSNYCFMNVFEDRIPGRAIIISVVCVFNHLYAHCQTSFFRLKDAKFLFSCSSTPQIDNLV 420
           GSNYCFMNVFEDRIPGRAIIISVVCVFNHLYAHCQTSFFRLKDAKFLFSCSSTPQIDNLV
Sbjct: 361 GSNYCFMNVFEDRIPGRAIIISVVCVFNHLYAHCQTSFFRLKDAKFLFSCSSTPQIDNLV 420

Query: 421 KGASGQAVQNLNLMMGLPENRGLQYQPLFP 450
           KGASGQAVQNLNLMMGLPENRGLQYQPLFP
Sbjct: 421 KGASGQAVQNLNLMMGLPENRGLQYQPLFP 450



>Os03g0617900 N-acetyl-gamma-glutamyl-phosphate reductase domain containing
           protein
          Length = 415

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/453 (76%), Positives = 366/453 (80%), Gaps = 46/453 (10%)

Query: 6   LGSVWLQLTSSAEFA---EKGVCGLNLKSCSGFMLKTTPKVGCPSLRVRASV-SSPQKLY 61
           +GS  L   + A      + GV G NLK C GFMLKTTPKVG  S+RVRASV SSPQK +
Sbjct: 1   MGSTALGGGAPARLGLAPKDGVFGSNLKQCGGFMLKTTPKVGSSSVRVRASVASSPQKQH 60

Query: 62  SSKTTQVKSGEEVQIAVLGASGYTGAEIVRLLANHPQFHIKVMTADRKASEQFGSVFPHL 121
           S KT+ VKSGEEV+IAVLGASGYTGAEIVRLLANHPQF IKVMTADRKA EQFGSVFPHL
Sbjct: 61  SPKTSGVKSGEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHL 120

Query: 122 ITQDLPNLVAIKDADFSNVDAVFCCLPHGTTQEIIKGLPKQLKIVDLSADFRLRDINEYA 181
           ITQDLPNLVA+KDADFSNVDAVFCCLPHGTTQEIIKGLP++LKIVDLSADFRLRDINEYA
Sbjct: 121 ITQDLPNLVAVKDADFSNVDAVFCCLPHGTTQEIIKGLPQELKIVDLSADFRLRDINEYA 180

Query: 182 EWYGHAHRAPELQQEAVYGLTEVLRDEIRNARLVANPGCYPTSIQLPLVPLIKAKLIKLS 241
           EWYGH+HRAPELQQEAVYGLTEVLR+EIRNARLVANPGCYPTSIQLPLVPLIKAKLIK+S
Sbjct: 181 EWYGHSHRAPELQQEAVYGLTEVLRNEIRNARLVANPGCYPTSIQLPLVPLIKAKLIKVS 240

Query: 242 NIIIDAK---SGSIKWLQNVYLYLAICPP-SAFKLALLTHCNKTVLAPEIEQGLSEAAKS 297
           NIIIDAK   SG+ +  +   LY  I     A+ +    H       PEIEQGLSEAA+S
Sbjct: 241 NIIIDAKSGVSGAGRGAKEANLYTEIAEGIHAYGIKGHRHV------PEIEQGLSEAAES 294

Query: 298 KVTISFTPNLICMKRGMQSTMFVEMAPGVTAGDLYQHLKSTYEGEEFVKLLHGSTVPHTR 357
           KVTISFTPNLICMKRGMQSTMFVEMAPGVTA DLYQHLKSTYEGEEFVKLL+GS+VPHTR
Sbjct: 295 KVTISFTPNLICMKRGMQSTMFVEMAPGVTANDLYQHLKSTYEGEEFVKLLNGSSVPHTR 354

Query: 358 HVVGSNYCFMNVFEDRIPGRAIIISVVCVFNHLYAHCQTSFFRLKDAKFLFSCSSTPQID 417
           HVVGSNYCFMNVFEDRIPGRAIIISV                                ID
Sbjct: 355 HVVGSNYCFMNVFEDRIPGRAIIISV--------------------------------ID 382

Query: 418 NLVKGASGQAVQNLNLMMGLPENRGLQYQPLFP 450
           NLVKGASGQAVQNLNLMMGLPEN GLQYQPLFP
Sbjct: 383 NLVKGASGQAVQNLNLMMGLPENTGLQYQPLFP 415



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,363,530
Number of extensions: 563144
Number of successful extensions: 1235
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1233
Number of HSP's successfully gapped: 3
Length of query: 450
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 346
Effective length of database: 11,605,545
Effective search space: 4015518570
Effective search space used: 4015518570
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)