BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0532700 Os09g0532700|AK069946
(695 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0532700 Alpha/beta hydrolase family protein 1236 0.0
Os09g0532800 Protein prenyltransferase domain containing pr... 165 8e-41
Os02g0705100 Epoxide hydrolase family protein 136 4e-32
Os05g0419000 Alpha/beta hydrolase family protein 113 5e-25
Os06g0354700 Esterase/lipase/thioesterase domain containing... 86 1e-16
>Os09g0532700 Alpha/beta hydrolase family protein
Length = 695
Score = 1236 bits (3199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/678 (90%), Positives = 612/678 (90%)
Query: 18 SAPRDPXXXXXXXXXXXXXXXXXXXXXXXXXWFKHDLRVDDHPGXXXXXXXXXXXXXXPL 77
SAPRDP WFKHDLRVDDHPG PL
Sbjct: 18 SAPRDPRLLLRRRLVVASSGAVKAPAAAAVVWFKHDLRVDDHPGLAAAVAAEPRRPVLPL 77
Query: 78 YVFDRRILDGYSDTMXXXXXXXXXXXKMVLKSQESDLLIGLGNAEDVVLKLVNEVQAGLI 137
YVFDRRILDGYSDTM KMVLKSQESDLLIGLGNAEDVVLKLVNEVQAGLI
Sbjct: 78 YVFDRRILDGYSDTMLELLLFALEDLKMVLKSQESDLLIGLGNAEDVVLKLVNEVQAGLI 137
Query: 138 FTEEEVEYRVRNVLASVESSLSNASFLSGNPPEIVVWSASLYDYKNPRELSTSHNQFLKE 197
FTEEEVEYRVRNVLASVESSLSNASFLSGNPPEIVVWSASLYDYKNPRELSTSHNQFLKE
Sbjct: 138 FTEEEVEYRVRNVLASVESSLSNASFLSGNPPEIVVWSASLYDYKNPRELSTSHNQFLKE 197
Query: 198 KLPMNTPLAAPSLPALNIEIETGSLPTLEELKGFLKESRTSENNWVPLKGTSARSILKKT 257
KLPMNTPLAAPSLPALNIEIETGSLPTLEELKGFLKESRTSENNWVPLKGTSARSILKKT
Sbjct: 198 KLPMNTPLAAPSLPALNIEIETGSLPTLEELKGFLKESRTSENNWVPLKGTSARSILKKT 257
Query: 258 LSQINVKTGVASSGSDGGEDTTAYYAMSGRKIQNSMFTSESSTEVRGGTEITLDALAAYL 317
LSQINVKTGVASSGSDGGEDTTAYYAMSGRKIQNSMFTSESSTEVRGGTEITLDALAAYL
Sbjct: 258 LSQINVKTGVASSGSDGGEDTTAYYAMSGRKIQNSMFTSESSTEVRGGTEITLDALAAYL 317
Query: 318 KYLEGTGKASWQELHDKVRLTETRDGASFCTLFGPALQLGVISKRRVYHETIQYERDRNA 377
KYLEGTGKASWQELHDKVRLTETRDGASFCTLFGPALQLGVISKRRVYHETIQYERDRNA
Sbjct: 318 KYLEGTGKASWQELHDKVRLTETRDGASFCTLFGPALQLGVISKRRVYHETIQYERDRNA 377
Query: 378 GFISPFGYSTPTVTAAVDAICSMEWYWLLALKSQVCIEGNYPVRIWRWKGHLIQYTSVGH 437
GFISPFGYSTPTVTAAVDAICSMEWYWLLALKSQVCIEGNYPVRIWRWKGHLIQYTSVGH
Sbjct: 378 GFISPFGYSTPTVTAAVDAICSMEWYWLLALKSQVCIEGNYPVRIWRWKGHLIQYTSVGH 437
Query: 438 EGPSVLLVHGFGASLQHFRDNIGAIADQGCQVWAITLLGFGKSEKPNINYSELLWSELLR 497
EGPSVLLVHGFGASLQHFRDNIGAIADQGCQVWAITLLGFGKSEKPNINYSELLWSELLR
Sbjct: 438 EGPSVLLVHGFGASLQHFRDNIGAIADQGCQVWAITLLGFGKSEKPNINYSELLWSELLR 497
Query: 498 DFIVDVVKEPVHLVGNSIGGYICSITASLWPSLARSLILLNTAGSVVPSYSFIPLSEEGR 557
DFIVDVVKEPVHLVGNSIGGYICSITASLWPSLARSLILLNTAGSVVPSYSFIPLSEEGR
Sbjct: 498 DFIVDVVKEPVHLVGNSIGGYICSITASLWPSLARSLILLNTAGSVVPSYSFIPLSEEGR 557
Query: 558 TSWXXXXXXXXXXXXXXXXAGGILKEYYPTRTERVDKPLVDEIIRASYDPGAATVIESIF 617
TSW AGGILKEYYPTRTERVDKPLVDEIIRASYDPGAATVIESIF
Sbjct: 558 TSWLSSLQARLLLLFLRSRAGGILKEYYPTRTERVDKPLVDEIIRASYDPGAATVIESIF 617
Query: 618 SFNLSIPLNFLFDSFGGKILIVQGMKDPLTKSKSFVSMLREHCSKVHIRELDAGHAPHDE 677
SFNLSIPLNFLFDSFGGKILIVQGMKDPLTKSKSFVSMLREHCSKVHIRELDAGHAPHDE
Sbjct: 618 SFNLSIPLNFLFDSFGGKILIVQGMKDPLTKSKSFVSMLREHCSKVHIRELDAGHAPHDE 677
Query: 678 VPDEVNSLLCEWIKETGA 695
VPDEVNSLLCEWIKETGA
Sbjct: 678 VPDEVNSLLCEWIKETGA 695
>Os09g0532800 Protein prenyltransferase domain containing protein
Length = 519
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/103 (80%), Positives = 93/103 (90%), Gaps = 2/103 (1%)
Query: 120 NAEDVVLKLVNEVQ--AGLIFTEEEVEYRVRNVLASVESSLSNASFLSGNPPEIVVWSAS 177
N E V+L+++ ++ + + +EEVEYRVRNVLASVESSLSNAS+LSGNPPEIVVWSAS
Sbjct: 389 NVEVVLLQVMKGIKHRSNINSRKEEVEYRVRNVLASVESSLSNASYLSGNPPEIVVWSAS 448
Query: 178 LYDYKNPRELSTSHNQFLKEKLPMNTPLAAPSLPALNIEIETG 220
LYDYKNPRELSTSHNQFLKEKLPMNTPLAAPSLPALNIEIETG
Sbjct: 449 LYDYKNPRELSTSHNQFLKEKLPMNTPLAAPSLPALNIEIETG 491
>Os02g0705100 Epoxide hydrolase family protein
Length = 410
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 136/303 (44%), Gaps = 42/303 (13%)
Query: 422 IWRWKGHLIQYTSVGHEGPSVLLVHGFGASLQHFRDNIGAIADQGCQVWAITLLGFGKSE 481
W W+G I Y G G ++L+HGFGAS H+R NI +A + +V+AI LLGFG SE
Sbjct: 107 FWTWRGRRIHYVEQG-AGQPIVLIHGFGASAFHWRYNIPELAKK-YKVYAIDLLGFGWSE 164
Query: 482 KPNINYSELLWSELLRDFIVDVVKEPVHLVGNSIGGYICSITASLWPSLARSLILLNTAG 541
K + Y +W E +RDF+ DVVK+P +VGNS+GG+ A+ P L R ++LLN+AG
Sbjct: 165 KALVEYEATIWMEQVRDFLRDVVKDPAVIVGNSLGGFTTLFAATEVPELVRGVVLLNSAG 224
Query: 542 SV-------------------VPSYSFIPLSEE------GRTSWXXXXXXXXXXXXXXXX 576
V PL E G W
Sbjct: 225 QFGDPNRPPEAAEAAAGEESAVTRLVVRPLKEAFQRVVLGFLFWQAKQPARVEK------ 278
Query: 577 AGGILKEYYPTRTERVDKPLVDEIIRASYDPGAATVIESIFSFNLSIPLNFLFDSFGGK- 635
+LK Y T VD+ L+ I + DP A V + S ++ + D GK
Sbjct: 279 ---VLKSVYKDATN-VDEYLIGSITAPTADPNAGEVYYRLMSRFMANQSRYTLDRLLGKL 334
Query: 636 ---ILIVQGMKDPLTKSKSFVSMLREHCSKVHIRELDAGHAPHDEVPDEVNSLLCEWIKE 692
+L++ G DP + +++ + L AGH PHDE P++ N L EW+
Sbjct: 335 SCPLLLLWGDLDPWVGPAK-AAQIKKFYQDTTVVNLQAGHCPHDEAPEQFNGALLEWLAS 393
Query: 693 TGA 695
A
Sbjct: 394 LDA 396
>Os05g0419000 Alpha/beta hydrolase family protein
Length = 403
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 136/291 (46%), Gaps = 30/291 (10%)
Query: 423 WRWKGHLIQYTSVGHEGPSVLLVHGFGASLQHFRDNIGAIADQGCQVWAITLLGFGKSEK 482
W W+G + Y G EGP +LLVHGFGAS+ H+R NIG ++ + V+AI LLGFG S+K
Sbjct: 103 WTWRGMRMNYLVRG-EGPPLLLVHGFGASVGHWRRNIGVLS-ESYTVYAIDLLGFGASDK 160
Query: 483 P-NINYSELLWSELLRDFIVDVVKEPVHLVGNSIGGYICSITASLWP-SLARSLILLNTA 540
P +Y+ W+EL+ DF+ +VV+ P LVGNS+G C I A+ L R L+LLN +
Sbjct: 161 PPGFSYTMETWAELILDFLDEVVRRPTVLVGNSVGSLACVIAAADSSRDLVRGLVLLNCS 220
Query: 541 GSVVPSYSFIPLSEEGRTSWXXXXXXXXXXXXXXXXAGGILKEYYPTRT----------- 589
G + + + ++ R L E R+
Sbjct: 221 GGM----NNKAIVDDWRIKLLLPLLWLIDFLLKQRRIASALFERVKDRSNLKDILLSVYG 276
Query: 590 --ERVDKPLVDEIIRASYD-PGAATVIESIFSFNLSIPLNFLFDSFGGK--ILIVQGMKD 644
+ VD LV EIIR D GA S + L + + +L++ G +D
Sbjct: 277 NKDAVDDELV-EIIRGPADGEGALDAFVSTVTGPPGPSPIALMPAVAARSPVLVLWGDRD 335
Query: 645 PLTKSKS----FVSMLREHCSKVHIRELDA-GHAPHDEVPDEVNSLLCEWI 690
P T + S L V + L+ GH PHD+ PD V++ L W+
Sbjct: 336 PFTPIDGPVGRYFSALPSELPNVTLHMLEGVGHCPHDDRPDLVHAKLLPWL 386
>Os06g0354700 Esterase/lipase/thioesterase domain containing protein
Length = 486
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 130/325 (40%), Gaps = 64/325 (19%)
Query: 422 IWRWKGHL-IQYTSVG---HEGPSVLLVHGFGASLQHFRDNIGAIADQGCQVWAITLLG- 476
W WK L + Y G + PSVL + GFG HF + + + +VW + LG
Sbjct: 105 FWEWKPKLSVYYEKSGIDNSKAPSVLFLPGFGVGTFHFEKQLKDLG-RDYKVWTMDFLGQ 163
Query: 477 -------------------------FGKSEKP---NINYSELLWSELLRDFIVDVVKEPV 508
FG+ +P + YS LW + ++ FI +V+ EPV
Sbjct: 164 GMSLPCEDPAPKSTSGELDEDTYWGFGQELQPWAEELVYSIDLWRDQVQHFIEEVIGEPV 223
Query: 509 HLVGNSIGGYICSITASLWPSLARSLILLNTAGSVVPSYSFIP-LSEEGRTS----WXXX 563
++VGNS+GG++ A+ P L + + LLN P + F+P + R S W
Sbjct: 224 YIVGNSLGGFVSLYLAASCPHLVKGVTLLNA----TPFWGFLPNPATSPRLSKIFPWAGT 279
Query: 564 XXXXXXXXXXXXXA----------GGILKEYYPTRTERVDKPLVDEIIRASYDPGAATVI 613
GILK+ Y + VD + II + P AA
Sbjct: 280 FPLPSFVRKLTETVWQKISDPRSIQGILKQVYADHSTNVDM-VFSRIIETTQHPAAAASF 338
Query: 614 ESIF-------SFNLSIPLNFLFDSFGGKILIVQGMKDPLTKSKSFVSMLREHCSKVHIR 666
SI SF ++ G I ++ G +DP + + + ++ +
Sbjct: 339 ASIMCAPKGQISFEEALSRC---QRQGIPISLMYGREDPWVRPIWGIKVKQQVPESPYYE 395
Query: 667 ELDAGHAPHDEVPDEVNSLLCEWIK 691
AGH PHDEVP+ +N LL W+K
Sbjct: 396 ISPAGHCPHDEVPEVINYLLRGWLK 420
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,315,850
Number of extensions: 858784
Number of successful extensions: 2129
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2123
Number of HSP's successfully gapped: 5
Length of query: 695
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 587
Effective length of database: 11,396,689
Effective search space: 6689856443
Effective search space used: 6689856443
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)