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Os09g0532700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Alpha/beta hydrolase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.52 (0.0338) R2 : 0.89
β1 : -3.19 (0.124) R2dD : 0.167 R2D : 0.137
β2 : 3.1 (0.102) R2dC : 0.345 R2C : 0.556
β3 : -1.57 (0.0918) R2dE : 0.109 R2E : 0.354
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.04 (0.0729) R2dN8 : 0.0679 R2N8 : 0.0307
σ : 0.632
deviance : 184.05
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_____
C
peak time of C : 9.79
E
wheather : temperature
threshold : 20.5
memory length : 31
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 19.9
open length of G : 7.89

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
179.19 0.629 9.51 -3.14 3.17 -1.49 1.32 1.36 -1.03 9.8 20.35 15 20 8
182.82 0.63 9.5 -3.23 3.13 -1.52 0.759 -- -1.02 9.77 20.47 27 19.9 7.98
183.61 0.631 9.5 -3.15 3.17 -1.52 -- 0.689 -1.02 9.77 20.3 18 20 7.96
184.05 0.632 9.52 -3.19 3.1 -1.57 -- -- -1.04 9.79 20.5 31 19.9 7.89
353.4 0.876 9.54 -2.3 -- -2.67 -- 0.0599 -0.954 -- 17.3 139 16.3 11
276.03 0.779 9.53 -3.33 4.11 -- 0.965 -- -1.21 10.4 -- -- -- --
279.81 0.783 9.53 -3.3 4.11 -- -- -- -1.2 10.4 -- -- -- --
274.3 0.771 9.66 -3.29 -- -3.4 -- -- -1.19 -- 14.5 212 16.2 9.98
424.66 0.96 9.45 -- 2.71 -2 -- -- -0.784 9.64 19.5 165 18.8 8.2
1309.94 1.69 9.64 -3.36 -- -- -- -- -1.22 -- -- -- -- --
566.13 1.11 9.45 -- 4.13 -- -- -- -0.838 10.4 -- -- -- --
452.6 0.991 9.65 -- -- -3.91 -- -- -0.679 -- 19.02 285 15.8 10.1
1608.2 1.87 9.56 -- -- -- -- -- -0.845 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 182.64 temperature 20.0 10 > th dose independent rect. 20 8
2 182.66 temperature 20.0 270 > th dose independent rect. 18 8
3 182.82 temperature 20.0 90 > th dose independent rect. 20 7
5 184.13 temperature 15.0 270 > th dose dependent rect. 19 7
11 187.09 temperature 15.0 10 > th dose dependent rect. 20 8
32 194.25 temperature 20.0 90 > th dose independent rect. 9 18
74 203.37 temperature 20.0 10 > th dose independent rect. 9 19
202 216.29 atmosphere 1010.0 90 < th dose independent rect. 20 7
210 216.95 wind 7.0 90 < th dose dependent rect. 3 6
225 218.08 wind 5.0 270 < th dose independent rect. 2 5
231 218.39 atmosphere 1010.0 270 < th dose independent rect. 18 8
273 220.57 atmosphere 995.0 270 > th dose independent rect. 7 19
275 220.61 precipitation 0.1 270 < th dose independent rect. 2 5
277 220.61 precipitation 0.1 270 < th dose dependent rect. 2 5
280 220.66 wind 5.0 270 < th dose independent rect. 3 3
285 220.86 temperature 10.0 90 > th dose dependent rect. 9 18
290 221.06 wind 7.0 270 < th dose dependent rect. 3 3
302 221.65 temperature 20.0 10 > th dose independent rect. 20 18
303 221.67 atmosphere 1015.0 90 < th dose independent rect. 9 18
304 221.74 precipitation 0.1 270 < th dose independent rect. 3 3
305 221.74 precipitation 0.1 270 < th dose dependent rect. 3 3
318 222.09 temperature 10.0 270 > th dose dependent rect. 2 5
319 222.10 temperature 10.0 270 > th dose dependent rect. 3 3
320 222.28 atmosphere 995.0 90 > th dose independent rect. 9 18
325 222.43 temperature 20.0 90 > th dose independent rect. 20 18
326 222.43 atmosphere 995.0 270 > th dose independent rect. 6 21
336 222.80 atmosphere 1015.0 270 < th dose independent rect. 7 19
337 222.81 precipitation 0.1 270 < th dose independent rect. 2 15
338 222.81 precipitation 0.1 270 < th dose dependent rect. 2 15
342 222.94 temperature 30.0 90 < th dose independent rect. 3 6
344 222.98 temperature 10.0 90 > th dose independent rect. 3 6
346 222.98 humidity 50.0 90 > th dose independent rect. 3 6
347 222.98 atmosphere 995.0 90 > th dose independent rect. 3 6
348 222.98 atmosphere 1015.0 90 < th dose independent rect. 3 6
350 222.99 radiation 40.0 90 < th dose independent rect. 3 6
362 223.27 wind 9.0 90 < th dose independent rect. 9 18
386 223.75 wind 9.0 270 < th dose independent rect. 7 19
397 224.09 atmosphere 995.0 270 > th dose independent rect. 17 9
407 224.35 humidity 80.0 30 > th dose independent rect. 20 8
415 224.51 radiation 40.0 270 < th dose dependent rect. 2 5
425 224.75 atmosphere 1000.0 30 > th dose independent rect. 20 8
439 225.02 temperature 10.0 270 > th dose independent rect. 3 3
441 225.02 temperature 30.0 270 < th dose independent rect. 3 3
442 225.02 humidity 50.0 270 > th dose independent rect. 3 3
445 225.02 atmosphere 995.0 270 > th dose independent rect. 3 3
446 225.02 atmosphere 1015.0 270 < th dose independent rect. 3 3
447 225.02 radiation 20.0 270 < th dose independent rect. 3 3
481 225.50 radiation 40.0 270 < th dose dependent rect. 3 3
491 225.74 wind 9.0 270 < th dose independent rect. 6 21
508 225.99 humidity 50.0 270 > th dose dependent rect. 2 5
532 226.41 radiation 1.0 270 < th dose dependent rect. 3 2
535 226.43 precipitation 0.1 270 < th dose independent rect. 7 19
536 226.43 precipitation 0.1 270 < th dose dependent rect. 7 19
563 226.54 radiation 20.0 270 < th dose dependent rect. 17 9
572 226.65 precipitation 0.1 10 < th dose independent rect. 3 6
573 226.65 precipitation 0.1 10 < th dose dependent rect. 3 6
575 226.70 precipitation 0.1 90 < th dose independent rect. 9 18
577 226.70 precipitation 0.1 90 < th dose dependent rect. 9 18
581 226.75 radiation 10.0 270 < th dose independent rect. 17 9
583 226.78 precipitation 0.1 270 < th dose independent rect. 14 17
584 226.78 precipitation 0.1 270 < th dose dependent rect. 14 17
595 227.00 humidity 50.0 270 > th dose dependent rect. 3 3
603 227.12 wind 9.0 90 < th dose dependent rect. 9 18
614 227.23 humidity 50.0 90 > th dose dependent rect. 19 8
620 227.25 temperature 10.0 270 > th dose independent rect. 2 15
621 227.25 atmosphere 1015.0 270 < th dose independent rect. 2 15
675 227.83 wind 9.0 270 < th dose independent rect. 17 9
682 227.89 temperature 10.0 10 > th dose dependent rect. 3 6
707 228.04 temperature 10.0 270 > th dose dependent rect. 19 17
720 228.15 humidity 50.0 270 > th dose independent rect. 18 8
737 228.26 wind 9.0 270 < th dose independent rect. 2 15
847 229.17 precipitation 0.1 270 < th dose independent rect. 6 21
848 229.17 precipitation 0.1 270 < th dose dependent rect. 6 21
859 229.28 radiation 1.0 10 < th dose dependent rect. 20 18
864 229.33 radiation 1.0 30 < th dose independent rect. 20 18
877 229.42 temperature 30.0 30 < th dose independent rect. 20 8
878 229.42 humidity 50.0 30 > th dose independent rect. 20 8
882 229.42 radiation 1.0 30 < th dose independent rect. 20 8
887 229.42 temperature 10.0 30 > th dose independent rect. 4 16
889 229.42 atmosphere 1015.0 30 < th dose independent rect. 4 16
890 229.42 radiation 1.0 30 < th dose dependent rect. 20 8
904 229.62 radiation 1.0 30 > th dose independent sin 11 NA
917 229.69 radiation 1.0 10 < th dose dependent rect. 20 16
923 229.74 precipitation 0.1 270 < th dose independent rect. 17 9
924 229.74 precipitation 0.1 270 < th dose dependent rect. 17 9
933 229.81 radiation 1.0 30 < th dose independent rect. 20 16
938 229.84 wind 9.0 30 < th dose independent rect. 20 8
953 229.84 wind 9.0 90 < th dose dependent rect. 19 8
961 229.88 radiation 1.0 270 < th dose dependent rect. 5 21
962 229.89 radiation 1.0 10 < th dose dependent rect. 20 12
968 229.93 wind 9.0 270 < th dose independent rect. 7 7
972 229.94 radiation 1.0 30 < th dose independent rect. 20 12
986 229.98 radiation 1.0 10 < th dose dependent rect. 20 10
989 230.01 wind 9.0 270 < th dose dependent rect. 7 19
990 230.02 wind 9.0 270 < th dose independent rect. 14 17