BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0529400 Os09g0529400|AK069350
         (371 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0529400  Protein of unknown function DUF295 family protein   553   e-158
Os11g0670866                                                      179   4e-45

>Os09g0529400 Protein of unknown function DUF295 family protein
          Length = 371

 Score =  553 bits (1426), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 288/371 (77%), Positives = 288/371 (77%)

Query: 1   MATAEAKRRRHHSPPASIAAGGXXXXXXXXXXXXXXXXXXXXXXXXARRLTSLEDFFSLR 60
           MATAEAKRRRHHSPPASIAAGG                        ARRLTSLEDFFSLR
Sbjct: 1   MATAEAKRRRHHSPPASIAAGGDSSTPTSAAPADSSSPSLDLIPDIARRLTSLEDFFSLR 60

Query: 61  ASCXXXXXXXXXXXXXXXSQSPLLLVSLYPSFAEAXXXXXXXXXXXXXXXWGHHLPPSRY 120
           ASC               SQSPLLLVSLYPSFAEA               WGHHLPPSRY
Sbjct: 61  ASCRAYRALLPASRRLLASQSPLLLVSLYPSFAEALFHPRLRRLHRFRLPWGHHLPPSRY 120

Query: 121 TLLYAHGFLVTSTTAANNYPPXXXXXXXXXXXXXXXPRVFAPFSRVILTADLLVVIFLPG 180
           TLLYAHGFLVTSTTAANNYPP               PRVFAPFSRVILTADLLVVIFLPG
Sbjct: 121 TLLYAHGFLVTSTTAANNYPPRLLLLRLFTGEQLRLPRVFAPFSRVILTADLLVVIFLPG 180

Query: 181 RATVQHCRPGDALWRVASAPAPHVFDDLISVNGTLYALVGLRLATLQXXXXXXXXXXXXX 240
           RATVQHCRPGDALWRVASAPAPHVFDDLISVNGTLYALVGLRLATLQ             
Sbjct: 181 RATVQHCRPGDALWRVASAPAPHVFDDLISVNGTLYALVGLRLATLQLSESSLELSFLGG 240

Query: 241 XHDDANRPEGDRFMLGECGGEVLLISVEHEERVVYRVFRWASEKRKWEMITNLGGRSLFL 300
            HDDANRPEGDRFMLGECGGEVLLISVEHEERVVYRVFRWASEKRKWEMITNLGGRSLFL
Sbjct: 241 EHDDANRPEGDRFMLGECGGEVLLISVEHEERVVYRVFRWASEKRKWEMITNLGGRSLFL 300

Query: 301 GLDGFAACVDQDHPGVRGDCLYAAGRRLGEWHEYSLADGTCDVCNADYPGAPPLNNSSLI 360
           GLDGFAACVDQDHPGVRGDCLYAAGRRLGEWHEYSLADGTCDVCNADYPGAPPLNNSSLI
Sbjct: 301 GLDGFAACVDQDHPGVRGDCLYAAGRRLGEWHEYSLADGTCDVCNADYPGAPPLNNSSLI 360

Query: 361 RPSVWIFPSLC 371
           RPSVWIFPSLC
Sbjct: 361 RPSVWIFPSLC 371



>Os11g0670866 
          Length = 276

 Score =  179 bits (453), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 93/115 (80%), Positives = 94/115 (81%), Gaps = 7/115 (6%)

Query: 111 WGHHLPPSRYTLLYAHGFLVTSTTAANNYPPXXXXXXXXXXXXXXXPRVFAPFSRVILTA 170
           WGHHLPPSRYTLLYAHGFL   TTAANNYPP               P+VFAPFSRVILTA
Sbjct: 152 WGHHLPPSRYTLLYAHGFL---TTAANNYPPRLLFTCEQLRL----PKVFAPFSRVILTA 204

Query: 171 DLLVVIFLPGRATVQHCRPGDALWRVASAPAPHVFDDLISVNGTLYALVGLRLAT 225
           DLLVVIFL GRATVQHC PGDALWRVASAPAP VFDDLISVNGTLYALVGLRLAT
Sbjct: 205 DLLVVIFLAGRATVQHCHPGDALWRVASAPAPQVFDDLISVNGTLYALVGLRLAT 259



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.138    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,132,126
Number of extensions: 404473
Number of successful extensions: 834
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 833
Number of HSP's successfully gapped: 2
Length of query: 371
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 269
Effective length of database: 11,709,973
Effective search space: 3149982737
Effective search space used: 3149982737
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)