BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0513000 Os09g0513000|AK121370
         (329 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0513000  Similar to TGB12K interacting protein 3             605   e-173
Os03g0851700  Similar to TGB12K interacting protein 3             376   e-104
Os08g0539600  Similar to TGB12K interacting protein 2             168   6e-42

>Os09g0513000 Similar to TGB12K interacting protein 3
          Length = 329

 Score =  605 bits (1561), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 299/329 (90%), Positives = 299/329 (90%)

Query: 1   MEDQKKNAKPEGSSGSQRGAPPAPDAGLPNPFDFSQFSNLLNDPSIKEMAEQIASDPVFT 60
           MEDQKKNAKPEGSSGSQRGAPPAPDAGLPNPFDFSQFSNLLNDPSIKEMAEQIASDPVFT
Sbjct: 1   MEDQKKNAKPEGSSGSQRGAPPAPDAGLPNPFDFSQFSNLLNDPSIKEMAEQIASDPVFT 60

Query: 61  QMAEQLQKSAHVTGEQGGPALDPQQYMETMTQVMQNPQFMSMAERLGNTLMQDPGMSSML 120
           QMAEQLQKSAHVTGEQGGPALDPQQYMETMTQVMQNPQFMSMAERLGNTLMQDPGMSSML
Sbjct: 61  QMAEQLQKSAHVTGEQGGPALDPQQYMETMTQVMQNPQFMSMAERLGNTLMQDPGMSSML 120

Query: 121 ESLTSPSHKELLEERMSRIKEDPSLKGILDEIESGGPSAMVKYWNDPEVLQKIGQAMSIN 180
           ESLTSPSHKELLEERMSRIKEDPSLKGILDEIESGGPSAMVKYWNDPEVLQKIGQAMSIN
Sbjct: 121 ESLTSPSHKELLEERMSRIKEDPSLKGILDEIESGGPSAMVKYWNDPEVLQKIGQAMSIN 180

Query: 181 FPGDAATSTTLSGPXXXXXXXXXXXXSIVHHTASVGDAEGLKKXXXXXXXXXXXXXXXXX 240
           FPGDAATSTTLSGP            SIVHHTASVGDAEGLKK                 
Sbjct: 181 FPGDAATSTTLSGPEETEEDGGDDDESIVHHTASVGDAEGLKKALEDGADMDEEDAEGRR 240

Query: 241 XLHFACGYGELKCAEILLEAGAAVNALDKNKNTPLHYAAGYGRKECVDLLLKHGAAVTPQ 300
            LHFACGYGELKCAEILLEAGAAVNALDKNKNTPLHYAAGYGRKECVDLLLKHGAAVTPQ
Sbjct: 241 ALHFACGYGELKCAEILLEAGAAVNALDKNKNTPLHYAAGYGRKECVDLLLKHGAAVTPQ 300

Query: 301 NLDGKTPIEVAKLNNQDEVLKVLEMDAFL 329
           NLDGKTPIEVAKLNNQDEVLKVLEMDAFL
Sbjct: 301 NLDGKTPIEVAKLNNQDEVLKVLEMDAFL 329



>Os03g0851700 Similar to TGB12K interacting protein 3
          Length = 350

 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/325 (60%), Positives = 228/325 (70%), Gaps = 18/325 (5%)

Query: 17  QRGAPPAPDAGLPNPFDFSQFSNLLNDPSIKEMAEQIASDPVFTQMAEQLQKSAH----- 71
           +RG PPA      NPFDFS   NLLNDPSIKEMAEQIA DP FT+MAEQLQK+       
Sbjct: 32  RRGVPPA------NPFDFSTMMNLLNDPSIKEMAEQIAKDPAFTEMAEQLQKTVQSPPAR 85

Query: 72  ----VTGEQGGPALDPQQYMETMTQVMQNPQFMSMAERLGNTLMQDPGMSSMLESLTSPS 127
                      PALDP +Y+ TM Q+MQNPQF++MAERLG+ LMQDP MSSML  LT+P+
Sbjct: 86  GAAQEAAAAAAPALDPSKYVSTMQQLMQNPQFVAMAERLGSALMQDPAMSSMLGGLTNPA 145

Query: 128 HKELLEERMSRIKEDPSLKGILDEIESGGPSAMVKYWNDPEVLQKIGQAMSIN---FPGD 184
           HKE LE R++R+K+DPSLK ILDEIE+GGP+AM+KYWNDPE LQK G+AM +        
Sbjct: 146 HKEQLEARIARMKDDPSLKPILDEIENGGPAAMMKYWNDPEALQKFGRAMGVGPSGEGAA 205

Query: 185 AATSTTLSGPXXXXXXXXXXXXSIVHHTASVGDAEGLKKXXXXXXXXXXXXXXXXXXLHF 244
           AA                    S++HHTASVGD EGLKK                  LHF
Sbjct: 206 AAGGEHEEAEEEGGEEGEYEDESVIHHTASVGDVEGLKKALEEGVDKDEEDSEGRRGLHF 265

Query: 245 ACGYGELKCAEILLEAGAAVNALDKNKNTPLHYAAGYGRKECVDLLLKHGAAVTPQNLDG 304
           ACGYGELKCA++LLEAGAAV+A+DKNKNT LHYAAGYGRK+CV LLL HGAAVT QNLDG
Sbjct: 266 ACGYGELKCAQVLLEAGAAVDAVDKNKNTALHYAAGYGRKDCVALLLDHGAAVTVQNLDG 325

Query: 305 KTPIEVAKLNNQDEVLKVLEMDAFL 329
           KT I+VAKLNNQ+EVLK+LE  AF+
Sbjct: 326 KTAIDVAKLNNQEEVLKLLEKHAFV 350



>Os08g0539600 Similar to TGB12K interacting protein 2
          Length = 122

 Score =  168 bits (425), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 82/116 (70%), Positives = 92/116 (79%)

Query: 214 SVGDAEGLKKXXXXXXXXXXXXXXXXXXLHFACGYGELKCAEILLEAGAAVNALDKNKNT 273
           S+GD EGLKK                  LHFACGYGELKCA++LLEAGAAV+ALDKNKNT
Sbjct: 7   SIGDDEGLKKALDGGADKDEEDSEGRRALHFACGYGELKCAQVLLEAGAAVDALDKNKNT 66

Query: 274 PLHYAAGYGRKECVDLLLKHGAAVTPQNLDGKTPIEVAKLNNQDEVLKVLEMDAFL 329
           PLHYAAGYG K CVDLLLK+GAAVT +N+DGKT I+VAKLNNQDEVL++LE DAFL
Sbjct: 67  PLHYAAGYGMKGCVDLLLKNGAAVTLENMDGKTAIDVAKLNNQDEVLRLLEKDAFL 122



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.311    0.129    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,477,071
Number of extensions: 412515
Number of successful extensions: 1451
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1452
Number of HSP's successfully gapped: 3
Length of query: 329
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 228
Effective length of database: 11,762,187
Effective search space: 2681778636
Effective search space used: 2681778636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 156 (64.7 bits)