BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0488000 Os09g0488000|AK063214
         (165 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0488000  GCN5-related N-acetyltransferase domain contai...   188   1e-48
Os02g0717700  GCN5-related N-acetyltransferase domain contai...   105   2e-23

>Os09g0488000 GCN5-related N-acetyltransferase domain containing protein
          Length = 165

 Score =  188 bits (478), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 100/165 (60%), Positives = 100/165 (60%)

Query: 1   MEQPLPTXXXXXXXXXXXXXXYRIRPLELADISRGFLGLLNQLSPSPPLTXXXXXXXXXX 60
           MEQPLPT              YRIRPLELADISRGFLGLLNQLSPSPPLT          
Sbjct: 1   MEQPLPTAAAEAAAAGGDGEAYRIRPLELADISRGFLGLLNQLSPSPPLTEEAFRARFEE 60

Query: 61  XXXXGADHLVLVXXXXXXXXXXXXXXXXXXXKFIRRCGRVGHVEDVVVDXXXXXXXXXXX 120
               GADHLVLV                   KFIRRCGRVGHVEDVVVD           
Sbjct: 61  LAALGADHLVLVAEDAATGRLAAAGAVLVERKFIRRCGRVGHVEDVVVDAAARGRGLGER 120

Query: 121 XXXXXXXHARGRGCYKVIINCTPELTGFYAKCGFVEKNVQMGLYF 165
                  HARGRGCYKVIINCTPELTGFYAKCGFVEKNVQMGLYF
Sbjct: 121 VVRRLVEHARGRGCYKVIINCTPELTGFYAKCGFVEKNVQMGLYF 165



>Os02g0717700 GCN5-related N-acetyltransferase domain containing protein
          Length = 157

 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 73/145 (50%), Gaps = 2/145 (1%)

Query: 23  RIRPLELADISRGFLGLLNQLSPSPPLTXXXXXXXXXXXXXXGADHLVLVXX--XXXXXX 80
           +IR LE  D  +GF+ LL+QLS  P LT              G DH++LV          
Sbjct: 13  QIRRLEATDHEKGFVALLSQLSACPDLTASEFAACFADLAALGDDHVILVAEDPAAPESR 72

Query: 81  XXXXXXXXXXXKFIRRCGRVGHVEDVVVDXXXXXXXXXXXXXXXXXXHARGRGCYKVIIN 140
                      KF+R  G+VGHVEDVVVD                   A+  GCYKVI++
Sbjct: 73  ILATGCLFVERKFLRGGGKVGHVEDVVVDAAARGRGLGLRVVRRLVEIAKEAGCYKVILD 132

Query: 141 CTPELTGFYAKCGFVEKNVQMGLYF 165
           CTPEL  +YAKCGFVEK VQM +YF
Sbjct: 133 CTPELRAYYAKCGFVEKGVQMAIYF 157



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.327    0.147    0.464 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,534,128
Number of extensions: 80441
Number of successful extensions: 146
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 142
Number of HSP's successfully gapped: 2
Length of query: 165
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 72
Effective length of database: 12,179,899
Effective search space: 876952728
Effective search space used: 876952728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 152 (63.2 bits)