BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0322900 Os09g0322900|Os09g0322900
(102 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0322900 Similar to Inositol-1-monophosphatase (EC 3.1.... 161 1e-40
Os07g0191000 Inositol monophosphatase family protein 145 5e-36
>Os09g0322900 Similar to Inositol-1-monophosphatase (EC 3.1.3.25)
Length = 102
Score = 161 bits (407), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 27 PVTIADREAEEAMDSVILKSFPSHAVFSEENGWRCIEKSDDYVCVLDPMDGTKSFITGKP 86
PVTIADREAEEAMDSVILKSFPSHAVFSEENGWRCIEKSDDYVCVLDPMDGTKSFITGKP
Sbjct: 27 PVTIADREAEEAMDSVILKSFPSHAVFSEENGWRCIEKSDDYVCVLDPMDGTKSFITGKP 86
Query: 87 LFGTLISLLYNGKPVF 102
LFGTLISLLYNGKPVF
Sbjct: 87 LFGTLISLLYNGKPVF 102
>Os07g0191000 Inositol monophosphatase family protein
Length = 340
Score = 145 bits (367), Expect = 5e-36, Method: Composition-based stats.
Identities = 68/75 (90%), Positives = 70/75 (93%)
Query: 27 PVTIADREAEEAMDSVILKSFPSHAVFSEENGWRCIEKSDDYVCVLDPMDGTKSFITGKP 86
PVTIADREAEEAM SVILKSFPSHAVF EENGWRC+EKS DYV VLDP+DGTKSFITGKP
Sbjct: 113 PVTIADREAEEAMVSVILKSFPSHAVFGEENGWRCVEKSADYVWVLDPIDGTKSFITGKP 172
Query: 87 LFGTLISLLYNGKPV 101
LFGTLISLLY GKPV
Sbjct: 173 LFGTLISLLYKGKPV 187
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.138 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,681,799
Number of extensions: 94553
Number of successful extensions: 155
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 156
Number of HSP's successfully gapped: 2
Length of query: 102
Length of database: 17,035,801
Length adjustment: 70
Effective length of query: 32
Effective length of database: 13,380,821
Effective search space: 428186272
Effective search space used: 428186272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 149 (62.0 bits)