FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0322900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Inositol-1-monophosphatase (EC 3.1.3.25).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.93 (0.0333) R2 : 0.0229
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.229 (0.0702) R2dN8 : 0.0296 R2N8 : 0.0229
σ : 0.628
deviance : 180.91
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
166.46 0.606 2.59 0.876 0.0425 -55.7 -0.0554 144 0.25 12.7 46 175 -- --
175.3 0.617 2.91 0.0833 0.00921 1.26 -0.0113 -- 0.247 2.9 49.59 81 -- --
163.22 0.595 2.39 1.43 0.0475 -57.2 -- 148 0.257 12.6 43.13 159 -- --
170.19 0.608 2.93 0.0408 0.0231 2.63 -- -- 0.246 16.3 46 175 -- --
163.27 0.595 2.39 1.43 -- -57.3 -- 149 0.248 -- 43.13 158 -- --
180.11 0.629 2.93 0.121 0.0741 -- 0.168 -- 0.244 15.2 -- -- -- --
180.19 0.629 2.93 0.124 0.0749 -- -- -- 0.245 14.5 -- -- -- --
170.19 0.608 2.93 0.0229 -- 2.63 -- -- 0.252 -- 46 175 -- --
170.16 0.608 2.93 -- 0.023 2.64 -- -- 0.246 13 46 175 -- --
180.52 0.628 2.93 0.121 -- -- -- -- 0.243 -- -- -- -- --
180.6 0.629 2.93 -- 0.0725 -- -- -- 0.231 14.4 -- -- -- --
170.2 0.608 2.93 -- -- 2.64 -- -- 0.249 -- 46 175 -- --
180.91 0.628 2.93 -- -- -- -- -- 0.229 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 157.65 humidity 50 10 < th dose independent rect. 15 2
2 158.27 humidity 50 30 < th dose dependent rect. 15 2
191 162.08 humidity 90 90 > th dose independent rect. 9 1
192 162.08 humidity 90 90 > th dose dependent rect. 9 1
198 162.14 humidity 60 1440 > th dose independent rect. 4 5
199 162.15 wind 1 30 < th dose independent rect. 15 1
203 162.15 wind 1 30 < th dose dependent rect. 15 1
208 162.19 humidity 70 10 < th dose dependent rect. 9 2
221 162.46 humidity 50 30 < th dose dependent sin 12 NA
224 162.86 humidity 60 10 < th dose independent rect. 10 1
244 162.93 humidity 60 1440 > th dose independent rect. 2 7
257 162.96 humidity 60 1440 > th dose independent rect. 20 13
352 163.16 humidity 50 90 < th dose independent sin 12 NA
355 163.29 wind 1 10 < th dose dependent rect. 8 4
356 163.33 humidity 50 90 > th dose independent sin 12 NA
364 163.45 humidity 60 10 < th dose dependent rect. 17 17
367 163.51 wind 1 10 < th dose independent rect. 8 5
375 163.63 humidity 60 10 < th dose independent rect. 17 17
376 163.65 humidity 60 90 < th dose independent rect. 17 17
384 163.71 humidity 60 4320 < th dose independent rect. 8 1
401 163.75 radiation 40 30 > th dose dependent rect. 9 2
502 163.79 humidity 60 4320 < th dose dependent rect. 8 1
530 163.86 radiation 40 10 > th dose independent rect. 9 2
725 164.40 radiation 40 10 > th dose independent sin 11 NA
745 164.44 wind 1 10 < th dose dependent rect. 8 10
826 164.78 radiation 40 30 > th dose dependent sin 11 NA
944 165.41 wind 1 10 < th dose independent rect. 8 15
949 165.43 wind 1 10 < th dose independent rect. 8 10