BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0557200 Os08g0557200|AK108300
(339 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0557200 Metallophosphoesterase domain containing protein 665 0.0
Os07g0688000 Metallophosphoesterase domain containing protein 458 e-129
Os01g0258501 200 1e-51
>Os08g0557200 Metallophosphoesterase domain containing protein
Length = 339
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/339 (97%), Positives = 329/339 (97%)
Query: 1 MLVQPPNAVAVRATAAGKEPLFSFGVIADVQYADIPDGRSFLGVPRYYRHSLTILQRAVR 60
MLVQPPNAVAVRATAAGKEPLFSFGVIADVQYADIPDGRSFLGVPRYYRHSLTILQRAVR
Sbjct: 1 MLVQPPNAVAVRATAAGKEPLFSFGVIADVQYADIPDGRSFLGVPRYYRHSLTILQRAVR 60
Query: 61 SWNAHNHKHPVAGGGVRFCVNFGDIVDGFCPKDRSLAAVQAVVAEFDRFHGPAYHMLGNH 120
SWNAHNHKHPVAGGGVRFCVNFGDIVDGFCPKDRSLAAVQAVVAEFDRFHGPAYHMLGNH
Sbjct: 61 SWNAHNHKHPVAGGGVRFCVNFGDIVDGFCPKDRSLAAVQAVVAEFDRFHGPAYHMLGNH 120
Query: 121 CLYNLPRSKLVSLLRMPSGRAYYDFSPFPGYRFVVLDAYDFSAVGWPRGHPVAAAARRFL 180
CLYNLPRSKLVSLLRMPSGRAYYDFSPFPGYRFVVLDAYDFSAVGWPRGHPVAAAARRFL
Sbjct: 121 CLYNLPRSKLVSLLRMPSGRAYYDFSPFPGYRFVVLDAYDFSAVGWPRGHPVAAAARRFL 180
Query: 181 DERNPNADKNSPSGLAGVDRRFVMFNGAVGEAQLRWLDGVLXXXXXXXXXXVVCSHLPLH 240
DERNPNADKNSPSGLAGVDRRFVMFNGAVGEAQLRWLDGVL VVCSHLPLH
Sbjct: 181 DERNPNADKNSPSGLAGVDRRFVMFNGAVGEAQLRWLDGVLRGAARRREAAVVCSHLPLH 240
Query: 241 PGAASPSGLMWNYEEVMRVVHRHGCVAACLAGHDHRGGYGVDARGVHHRTLEAALECPPG 300
PGAASPSGLMWNYEEVMRVVHRHGCVAACLAGHDHRGGYGVDARGVHHRTLEAALECPPG
Sbjct: 241 PGAASPSGLMWNYEEVMRVVHRHGCVAACLAGHDHRGGYGVDARGVHHRTLEAALECPPG 300
Query: 301 TDAFGRVDVYPDGLTLVGAGRMGSTDMRLQLHSPVTELS 339
TDAFGRVDVYPDGLTLVGAGRMGSTDMRLQLHSPVTELS
Sbjct: 301 TDAFGRVDVYPDGLTLVGAGRMGSTDMRLQLHSPVTELS 339
>Os07g0688000 Metallophosphoesterase domain containing protein
Length = 321
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 211/318 (66%), Positives = 254/318 (79%), Gaps = 10/318 (3%)
Query: 15 AAGKEPLFSFGVIADVQYADIPDGRSFLGVPRYYRHSLTILQRAVRSWNAHNHKHPVAGG 74
A+ +EPLFSFGVIADVQYADIPDGRSFLGVPRYYRHS+++LQRAV +WN ++
Sbjct: 11 ASSREPLFSFGVIADVQYADIPDGRSFLGVPRYYRHSISVLQRAVSTWNKQHN------- 63
Query: 75 GVRFCVNFGDIVDGFCPKDRSLAAVQAVVAEFDRFHGPAYHMLGNHCLYNLPRSKLVSLL 134
++F +NFGDI+DG+CPKD+SL AVQ V+ EF++F GP YHM GNHCLYNLPR KLVSLL
Sbjct: 64 -IKFSINFGDIIDGYCPKDKSLWAVQKVLDEFEKFDGPTYHMFGNHCLYNLPRGKLVSLL 122
Query: 135 RMP--SGRAYYDFSPFPGYRFVVLDAYDFSAVGWPRGHPVAAAARRFLDERNPNADKNSP 192
+MP S RAYYDFSP P YRFVVLDAYDFSA+GWPR HPV A A +FL+E+NPN+DKNSP
Sbjct: 123 KMPTDSDRAYYDFSPCPEYRFVVLDAYDFSALGWPRDHPVTAEAMKFLEEKNPNSDKNSP 182
Query: 193 SGLAGVDRRFVMFNGAVGEAQLRWLDGVLXXXXXXXXXXVVCSHLPLHPGAASPSGLMWN 252
GL GVDRRFVMFNG VG+ QL WL+ VL ++CSHLP+ PG+AS + LMWN
Sbjct: 183 DGLVGVDRRFVMFNGGVGKEQLSWLNDVLQDASARRQNVILCSHLPMDPGSASFAALMWN 242
Query: 253 YEEVMRVVHRHGCVAACLAGHDHRGGYGVDARGVHHRTLEAALECPPGTDAFGRVDVYPD 312
Y+EVM +V ++ CV AC AGHDH+GG+ VD+ GVHHRTLEAALECPPGT AFG ++VYPD
Sbjct: 243 YDEVMAIVRQYKCVKACFAGHDHKGGHSVDSHGVHHRTLEAALECPPGTSAFGHIEVYPD 302
Query: 313 GLTLVGAGRMGSTDMRLQ 330
L LVG+ +M T+M +
Sbjct: 303 KLLLVGSDKMADTEMCFE 320
>Os01g0258501
Length = 174
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 127/221 (57%), Gaps = 74/221 (33%)
Query: 1 MLVQPPNAVAVRATAAGKEPLFSFGVIADVQYADIPDGRSFLGVPRYYRHSLTILQRAVR 60
MLVQPPNA D Q+ DIPDGRSFLGVPRYYRHSLT+LQRAVR
Sbjct: 1 MLVQPPNA--------------------DAQHTDIPDGRSFLGVPRYYRHSLTVLQRAVR 40
Query: 61 SWNAHNHKHPVAGGGVRFCVNFGDIVDGFCPKDRSLAAVQAVVAEFDRFHGPAYHMLGNH 120
SWNAHNHKHP+ V V DRSL AVQAVVAEFDRF
Sbjct: 41 SWNAHNHKHPMTAA-----VAPSAFVS---TSDRSLLAVQAVVAEFDRF----------- 81
Query: 121 CLYNLPRSKLVSLLRMPSGRAYYDFSPFPGYRFVVLDAYDFSAVGWPRGHPVAAAARRFL 180
LDAYDF+AVGW R HP+AAAA RFL
Sbjct: 82 -----------------------------------LDAYDFNAVGWSRDHPMAAAAGRFL 106
Query: 181 DERNPNADKNSPSGLAGVDRRFVMFNGAVGEAQLRWLDGVL 221
D+RNPN DKN+PSGLAGV RRFVMFNGAV EAQLRWLDGVL
Sbjct: 107 DKRNPNTDKNNPSGLAGVARRFVMFNGAVCEAQLRWLDGVL 147
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.140 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,792,050
Number of extensions: 645615
Number of successful extensions: 1513
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1509
Number of HSP's successfully gapped: 4
Length of query: 339
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 237
Effective length of database: 11,709,973
Effective search space: 2775263601
Effective search space used: 2775263601
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 156 (64.7 bits)