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Os08g0557200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Metallophosphoesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0422) R2 : 0.905
β1 : -0.891 (0.154) R2dD : 0.00715 R2D : -0.0044
β2 : 3.87 (0.177) R2dC : 0.281 R2C : 0.653
β3 : -3.7 (0.197) R2dE : 0.207 R2E : 0.587
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.18 (0.0895) R2dN8 : 0.0483 R2N8 : 0.0245
σ : 0.784
deviance : 283.53
__
_____
C
peak time of C : 8.52
E
wheather : radiation
threshold : 13.34
memory length : 10
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 13.7
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
269.91 0.772 10.1 -0.924 4.14 -3.59 2.6 0.856 -1.17 8.53 11.45 10 14.1 --
270.69 0.766 10.1 -0.868 4.04 -3.61 2.13 -- -1.15 8.56 12.85 10 13.9 --
277.46 0.776 10.1 -0.897 3.72 -3.73 -- -1.59 -1.17 8.47 14.16 10 13.4 --
283.53 0.784 10.1 -0.891 3.87 -3.7 -- -- -1.18 8.52 13.34 10 13.7 --
349.82 0.871 10.3 -0.915 -- -6.55 -- -3.63 -1.09 -- 47.89 41 11.2 --
469.03 1.02 10 -0.884 6.61 -- 2.21 -- -1.16 8.21 -- -- -- --
484 1.03 10 -0.821 6.61 -- -- -- -1.16 8.2 -- -- -- --
340.39 0.859 10.2 -0.932 -- -6.73 -- -- -1.36 -- 55.86 25 10.9 --
302.61 0.81 10 -- 4.15 -3.58 -- -- -1.08 8.5 10.77 10 14.1 --
2896.39 2.51 10.2 -0.77 -- -- -- -- -1.09 -- -- -- -- --
501.75 1.05 9.98 -- 6.61 -- -- -- -1.07 8.21 -- -- -- --
361 0.885 10.2 -- -- -6.73 -- -- -1.25 -- 56.52 25 10.9 --
2912.03 2.52 10.1 -- -- -- -- -- -1 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 272.03 radiation 10.0 10 < th dose dependent sin 20 NA
14 293.30 radiation 1.0 270 > th dose independent rect. 8 7
16 294.34 radiation 40.0 270 < th dose dependent rect. 14 5
17 294.56 radiation 30.0 270 < th dose independent rect. 14 5
20 296.27 temperature 20.0 270 > th dose independent rect. 15 4
25 297.69 atmosphere 995.0 270 > th dose independent rect. 15 4
28 298.40 atmosphere 995.0 270 > th dose independent rect. 14 6
29 298.97 temperature 20.0 270 > th dose independent rect. 14 6
30 299.19 atmosphere 995.0 270 > th dose independent rect. 15 17
32 299.71 radiation 30.0 270 < th dose independent rect. 15 17
33 299.74 radiation 40.0 270 < th dose independent rect. 14 19
37 300.73 radiation 20.0 10 < th dose dependent rect. 7 14
57 303.13 humidity 50.0 270 > th dose independent rect. 15 4
58 303.17 precipitation 0.1 270 < th dose independent rect. 8 7
59 303.17 precipitation 0.1 270 < th dose dependent rect. 8 7
60 303.42 precipitation 0.1 270 < th dose independent rect. 19 20
61 303.42 precipitation 0.1 270 < th dose dependent rect. 19 20
63 303.71 temperature 10.0 270 > th dose independent rect. 15 4
65 303.71 atmosphere 1010.0 270 < th dose independent rect. 15 4
67 303.71 temperature 10.0 270 > th dose independent rect. 19 20
69 303.90 temperature 10.0 270 > th dose independent rect. 8 7
70 303.90 atmosphere 1015.0 270 < th dose independent rect. 8 7
71 303.90 temperature 10.0 270 > th dose independent rect. 15 17
77 305.03 atmosphere 995.0 270 > th dose independent rect. 14 19
83 305.66 radiation 40.0 90 < th dose dependent rect. 16 18
85 305.83 wind 9.0 270 < th dose independent rect. 19 20
86 305.93 wind 9.0 270 < th dose independent rect. 15 4
87 305.98 wind 9.0 270 < th dose independent rect. 8 7
91 306.18 temperature 10.0 270 > th dose independent rect. 14 6
92 306.18 atmosphere 1015.0 270 < th dose independent rect. 14 6
93 306.18 temperature 10.0 270 > th dose independent rect. 20 18
94 306.18 atmosphere 995.0 270 > th dose independent rect. 20 18
97 306.42 wind 9.0 270 < th dose independent rect. 15 17
100 306.60 wind 1.0 270 > th dose independent rect. 15 4
105 306.74 wind 9.0 270 < th dose independent rect. 19 9
107 306.80 temperature 10.0 270 > th dose independent rect. 19 9
108 306.80 temperature 30.0 270 < th dose independent rect. 19 9
109 306.80 humidity 50.0 270 > th dose independent rect. 19 9
110 306.80 atmosphere 995.0 270 > th dose independent rect. 19 9
111 306.80 radiation 1.0 270 < th dose independent rect. 19 9
116 306.80 temperature 10.0 270 > th dose independent rect. 4 15
117 306.80 atmosphere 1015.0 270 < th dose independent rect. 4 15
118 306.80 radiation 20.0 270 < th dose dependent rect. 19 9
128 307.17 temperature 20.0 270 > th dose independent rect. 16 2
132 307.34 humidity 50.0 270 > th dose independent rect. 14 6
133 307.50 atmosphere 995.0 270 > th dose independent rect. 4 15
139 307.89 wind 9.0 270 < th dose independent rect. 20 18
142 308.03 wind 1.0 270 > th dose independent rect. 14 6
143 308.08 wind 9.0 270 < th dose independent rect. 14 6
144 308.09 radiation 1.0 90 > th dose independent rect. 11 5
147 308.68 precipitation 0.1 270 < th dose independent rect. 20 18
148 308.68 precipitation 0.1 270 < th dose dependent rect. 20 18
154 309.14 atmosphere 995.0 270 > th dose independent rect. 19 20
156 309.20 radiation 1.0 30 > th dose independent sin 22 NA
157 309.23 precipitation 0.1 270 < th dose independent rect. 19 9
158 309.23 precipitation 0.1 270 < th dose dependent rect. 19 9
159 309.24 precipitation 0.1 270 < th dose independent rect. 9 5
160 309.24 precipitation 0.1 270 < th dose dependent rect. 9 5
165 309.74 atmosphere 995.0 270 > th dose independent rect. 16 2
167 309.84 radiation 1.0 30 < th dose independent sin 22 NA
172 310.05 atmosphere 995.0 270 > th dose independent rect. 8 7
173 310.05 wind 9.0 270 < th dose independent rect. 4 15
174 310.10 temperature 10.0 270 > th dose independent rect. 9 5
175 310.10 atmosphere 995.0 270 > th dose independent rect. 9 5
176 310.10 atmosphere 1015.0 270 < th dose independent rect. 9 5
178 310.10 temperature 10.0 270 > th dose independent rect. 14 19
181 310.31 radiation 1.0 10 > th dose independent rect. 10 8
183 310.50 atmosphere 1015.0 270 < th dose independent rect. 15 17
185 310.60 radiation 10.0 10 > th dose independent sin 19 NA
187 310.96 radiation 1.0 10 > th dose independent rect. 10 6
204 311.80 wind 9.0 270 < th dose independent rect. 9 5
211 312.34 precipitation 0.1 270 < th dose independent rect. 10 15
212 312.34 precipitation 0.1 270 < th dose dependent rect. 10 15
217 312.53 wind 9.0 270 < th dose independent rect. 14 19
229 312.93 humidity 50.0 90 > th dose independent rect. 16 17
230 312.94 radiation 30.0 90 < th dose dependent rect. 13 8
255 313.77 precipitation 0.1 270 < th dose independent rect. 15 4
256 313.77 precipitation 0.1 270 < th dose dependent rect. 15 4
258 313.78 atmosphere 1015.0 270 < th dose independent rect. 14 19
269 314.16 precipitation 0.1 270 < th dose independent rect. 18 22
270 314.16 precipitation 0.1 270 < th dose dependent rect. 18 22
299 315.21 temperature 10.0 270 > th dose independent rect. 16 2
301 315.21 atmosphere 1010.0 270 < th dose independent rect. 16 2
304 315.21 temperature 10.0 270 > th dose independent rect. 18 22
305 315.24 wind 1.0 270 > th dose independent rect. 8 7
307 315.28 temperature 10.0 270 > th dose dependent rect. 9 5
330 315.81 radiation 10.0 10 < th dose independent sin 19 NA
339 316.02 wind 1.0 270 > th dose independent rect. 16 2
383 317.47 wind 9.0 270 < th dose independent rect. 16 2
417 318.33 humidity 50.0 270 > th dose independent rect. 20 18
420 318.35 radiation 10.0 270 > th dose independent rect. 11 2
429 318.65 radiation 1.0 90 < th dose independent rect. 8 11
435 318.68 radiation 1.0 90 < th dose independent rect. 11 8
436 318.68 wind 9.0 270 < th dose independent rect. 18 22
444 318.83 temperature 15.0 270 > th dose independent rect. 1 9
445 318.89 wind 1.0 270 > th dose independent rect. 9 5
450 318.96 temperature 10.0 270 > th dose dependent rect. 8 7
478 319.19 atmosphere 995.0 270 > th dose independent rect. 1 9
479 319.19 atmosphere 1015.0 270 < th dose independent rect. 1 9
480 319.19 temperature 10.0 270 > th dose independent rect. 10 15
481 319.20 wind 9.0 270 < th dose independent rect. 1 9
487 319.40 humidity 50.0 270 > th dose independent rect. 1 9
497 319.71 atmosphere 995.0 270 > th dose dependent rect. 15 4
502 319.77 precipitation 0.1 270 < th dose independent rect. 14 6
503 319.77 precipitation 0.1 270 < th dose dependent rect. 14 6
511 319.86 atmosphere 995.0 10 > th dose independent rect. 16 18
533 320.21 wind 9.0 270 < th dose independent rect. 10 15
534 320.22 humidity 50.0 10 > th dose dependent rect. 16 4
540 320.45 precipitation 0.1 270 < th dose independent rect. 15 17
541 320.45 precipitation 0.1 270 < th dose dependent rect. 15 17
559 320.81 radiation 1.0 10 < th dose independent rect. 6 14
566 320.91 radiation 10.0 10 < th dose independent rect. 14 7
569 320.94 humidity 50.0 270 > th dose independent rect. 19 20
575 321.13 humidity 50.0 270 > th dose independent rect. 14 19
585 321.36 radiation 1.0 10 < th dose independent rect. 11 9
601 321.77 atmosphere 1015.0 10 < th dose independent rect. 16 18
602 321.80 temperature 10.0 10 > th dose dependent rect. 10 6
619 322.07 humidity 90.0 270 < th dose independent rect. 10 4
648 322.51 precipitation 0.1 270 < th dose independent rect. 1 9
649 322.51 precipitation 0.1 270 < th dose dependent rect. 1 9
672 322.92 precipitation 0.1 270 < th dose independent rect. 4 15
673 322.92 precipitation 0.1 270 < th dose dependent rect. 4 15
750 324.15 atmosphere 995.0 10 > th dose independent rect. 16 5
774 324.40 wind 1.0 270 > th dose dependent rect. 15 4
788 324.77 radiation 40.0 270 < th dose dependent rect. 3 16
803 325.17 humidity 50.0 270 > th dose independent rect. 9 5
817 325.43 temperature 10.0 10 > th dose independent rect. 10 6
819 325.43 atmosphere 1015.0 10 < th dose independent rect. 10 6
820 325.43 precipitation 0.1 10 < th dose independent rect. 10 6
821 325.43 temperature 10.0 10 > th dose independent rect. 16 18
822 325.43 precipitation 0.1 10 < th dose dependent rect. 10 6
876 326.14 radiation 40.0 270 < th dose independent rect. 3 16
896 326.35 temperature 10.0 1440 > th dose independent rect. 11 6
901 326.35 temperature 10.0 1440 > th dose independent rect. 17 18
944 326.83 wind 1.0 10 > th dose independent rect. 16 7
987 327.19 humidity 50.0 270 > th dose independent rect. 8 7
991 327.36 precipitation 0.1 270 < th dose independent rect. 14 19
992 327.36 precipitation 0.1 270 < th dose dependent rect. 14 19
993 327.44 wind 9.0 10 < th dose independent rect. 10 6