BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0519900 Os08g0519900|Os08g0519900
(687 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0519900 Exo70 exocyst complex subunit family protein 798 0.0
Os02g0484700 89 1e-17
Os06g0698600 Exo70 exocyst complex subunit family protein 82 1e-15
>Os08g0519900 Exo70 exocyst complex subunit family protein
Length = 687
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/687 (64%), Positives = 440/687 (64%)
Query: 1 MCTHASTPAIAGGDTVLEQLRASRAAIVSVLXXXXXXXXXXXXXGDRLGDMYSGLPXXXX 60
MCTHASTPAIAGGDTVLEQLRASRAAIVSVL GDRLGDMYSGLP
Sbjct: 1 MCTHASTPAIAGGDTVLEQLRASRAAIVSVLATAVEAEAAIDAAGDRLGDMYSGLPSSSQ 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVGR 120
FVGR
Sbjct: 61 LQSQAVAARALRARIDRAVAPAGPLLAALRRVSALAEEAAAALPAADPGDAGGAAAFVGR 120
Query: 121 VDRLRDAVEEAVARGDEAVRRVEEAVGFLGRTKATXXXXXXXXXXXXXXXXXXXXXXXXX 180
VDRLRDAVEEAVARGDEAVRRVEEAVGFLGRTKAT
Sbjct: 121 VDRLRDAVEEAVARGDEAVRRVEEAVGFLGRTKATGRGRVRRLAEAAAALRAVHEAEAEE 180
Query: 181 MRFEGPLDEALLGLQDLFEAXXXXXXXXXXXXXXXXXXXXXXXXXXXTDDEVDAAARIAR 240
MRFEGPLDEALLGLQDLFEA TDDEVDAAARIAR
Sbjct: 181 MRFEGPLDEALLGLQDLFEALLLRLKHPGRGGGGGEVSDVEEEYELGTDDEVDAAARIAR 240
Query: 241 TLAGNDCLDICLDIYVKVRYRRAAKAMMRLNPEYLKSYTPEDVDAMEWEALESAMALWGP 300
TLAGNDCLDICLDIYVKVRYRRAAKAMMRLNPEYLKSYTPEDVDAMEWEALESAMALWGP
Sbjct: 241 TLAGNDCLDICLDIYVKVRYRRAAKAMMRLNPEYLKSYTPEDVDAMEWEALESAMALWGP 300
Query: 301 HFHVAISGVLAAERWLCARVLAPLPPAVWPECXXXXXXXXXXXXXXXXXXXXXXXXREPQ 360
HFHVAISGVLAAERWLCARVLAPLPPAVWPEC REPQ
Sbjct: 301 HFHVAISGVLAAERWLCARVLAPLPPAVWPECFAKIAARIAAAFFRFADGVAAAAAREPQ 360
Query: 361 RLFRLLDMLDAVARERGRLDELFSGESATXXXXXXXXXXXXXXXXXXXXXXFYEFGLRVE 420
RLFRLLDMLDAVARERGRLDELFSGESAT FYEFGLRVE
Sbjct: 361 RLFRLLDMLDAVARERGRLDELFSGESATLLAIRERAREVERALARAAAAAFYEFGLRVE 420
Query: 421 THYVTAAAAGESGHVPKIVRYAVNYLKCLASDDYRGTMXXXXXXXXXXXXXXXXXXXXXX 480
THYVTAAAAGESGHVPKIVRYAVNYLKCLASDDYRGTM
Sbjct: 421 THYVTAAAAGESGHVPKIVRYAVNYLKCLASDDYRGTMDAALRAGAGDDDGGDSEALAEA 480
Query: 481 XXNVLEALHRHVEAARRALPDAVASHVMAMNSYWYIYMRARGSELASLVGDDTMRRRYKA 540
NVLEALHRHVEAARRALPDAVASHVMAMNSYWYIYMRARGSELASLVGDDTMRRRYKA
Sbjct: 481 ASNVLEALHRHVEAARRALPDAVASHVMAMNSYWYIYMRARGSELASLVGDDTMRRRYKA 540
Query: 541 SAEEAAWEYQDAAWGPLVRLVSGSSSGAAKAWPSPXXXXXXXXXXXXXXXXXXXXHGAEY 600
SAEEAAWEYQDAAWGPLVRLVSGSSSGAAKAWPSP HGAEY
Sbjct: 541 SAEEAAWEYQDAAWGPLVRLVSGSSSGAAKAWPSPEEAREKAAAFADALEERARRHGAEY 600
Query: 601 KIPDGDLREQIKXXXXXXXXXXXXGFLRANDSAVASGGGRREFLPVDAIEGMVRRVFDEM 660
KIPDGDLREQIK GFLRANDSAVASGGGRREFLPVDAIEGMVRRVFDEM
Sbjct: 601 KIPDGDLREQIKAAAAKAVRGAYAGFLRANDSAVASGGGRREFLPVDAIEGMVRRVFDEM 660
Query: 661 XXXXXXXXXXXXXXXXXXXXNLEGFEG 687
NLEGFEG
Sbjct: 661 GDGGGVAGSAGRTRSRRQSGNLEGFEG 687
>Os02g0484700
Length = 355
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 117 FVGRVDRLRDAVEEAVARGDEAVRRVEEAVGFLGRTKATXXXXXXXXXXXXXXXXXXX-X 175
FVG VD+L DA+EEAVARGDEAVRRVEE VGFLG+TKA
Sbjct: 192 FVGHVDQLCDAIEEAVARGDEAVRRVEEVVGFLGQTKAIGRSCVRRLTDAVAAALRAVYE 251
Query: 176 XXXXXMRFEGPLDEALLGLQDLFEA 200
MRFEGPLDEALL LQDLFEA
Sbjct: 252 AEAEEMRFEGPLDEALLDLQDLFEA 276
>Os06g0698600 Exo70 exocyst complex subunit family protein
Length = 673
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 124/322 (38%), Gaps = 13/322 (4%)
Query: 242 LAGNDCLDICLDIYVKVRYRRAAKAMMRLNPEYLKSYTPEDVDAMEWEALESAMALWGPH 301
LA N L C Y R + ++ L +YL + P A + + L + WG H
Sbjct: 231 LAANGRLGTCTAAYADARGDTVSASLRALGLDYL--HDP----AEDAQVLTPNVEHWGRH 284
Query: 302 FHVAISGVLAAERWLCARVLAPLPPAVWPECXXXXXXXXXXXXXXXXXXXXXXXXREPQR 361
A+ +L AER LC V P A C ++P +
Sbjct: 285 LEFAVRHLLEAERKLCVAVFERRPEAA-SSCFAEIASRAGILDFLKFGRAICDARKDPIK 343
Query: 362 LFRLLDMLDAVARERGRLDELFSGESATXXXXXXXXXXXXXXXXXXXXXXFYEFGLRVET 421
L RLLD+ D++++ R + LF G++ F E ++VE
Sbjct: 344 LLRLLDVFDSLSKLRMDFNRLFGGKACVEIQTRTRELVKRVVDGSVEI--FEELLVQVEL 401
Query: 422 HYVTAAAAGESGHVPKIVRYAVNYLKCLASDDYRGTMXXXXXXXXX-XXXXXXXXXXXXX 480
A G VP+IV + Y L D YR +
Sbjct: 402 QRNMPPPA--DGGVPRIVSFVAKYCNQLLGDPYRSVLTQVLVIHRSWRKETFNDKMLVDA 459
Query: 481 XXNVLEALHRHVEAARRALPDAVASHVMAMNSYWYIYMRARGSELASLVGDDTMRRRYKA 540
N+++AL + EA +A D S++ MN++W+ + +G+++ ++GD+ +R +
Sbjct: 460 VLNIVKALEANFEAWSKAYEDVTLSYLFMMNTHWHFFKHLKGTKMGEILGDEWLREHEQY 519
Query: 541 SAEEAAWEYQDAAWGPLVRLVS 562
+A + +WG L L+S
Sbjct: 520 KDYYSAV-FLRESWGTLAPLLS 540
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,867,004
Number of extensions: 430438
Number of successful extensions: 1147
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1139
Number of HSP's successfully gapped: 4
Length of query: 687
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 579
Effective length of database: 11,396,689
Effective search space: 6598682931
Effective search space used: 6598682931
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)