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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0519900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Exo70 exocyst complex subunit family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.24 (0.0499) R2 : 0.308
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.73 (0.126) R2dC : 0.289 R2C : 0.288
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.334 (0.105) R2dN8 : 0.0199 R2N8 : 0.0188
σ : 0.941
deviance : 404.89
__
_____
C
peak time of C : 15.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
377.27 0.913 4.03 1.99 1.73 -0.747 0.857 5.5 0.115 15.4 26.6 4381 -- --
388.56 0.918 4.15 1.27 1.67 -0.738 0.72 -- 0.0469 15.3 20.6 25859 -- --
379.34 0.907 4.03 2.02 1.72 -0.744 -- 5.65 0.128 15.5 26.9 4396 -- --
389.91 0.92 4.16 1.29 1.72 -0.784 -- -- 0.0463 15.5 21 26489 -- --
527.55 1.08 4.26 0.321 -- 0.641 -- 0.545 -0.484 -- 26.65 4145 -- --
397.47 0.935 4.23 0.433 1.74 -- 0.832 -- -0.289 15.4 -- -- -- --
399.6 0.936 4.23 0.448 1.74 -- -- -- -0.284 15.4 -- -- -- --
528.41 1.08 4.27 0.202 -- 0.662 -- -- -0.522 -- 26.65 4145 -- --
400.61 0.932 4.22 -- 1.73 -0.262 -- -- -0.275 15.4 28.5 7109 -- --
569.92 1.12 4.23 0.374 -- -- -- -- -0.331 -- -- -- -- --
404.89 0.941 4.24 -- 1.73 -- -- -- -0.334 15.5 -- -- -- --
529.47 1.08 4.28 -- -- 0.676 -- -- -0.549 -- 26.65 4145 -- --
573.62 1.12 4.24 -- -- -- -- -- -0.372 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 365.40 temperature 15 270 > th dose dependent rect. 2 7
20 370.13 temperature 20 270 > th dose independent rect. 3 6
25 370.89 radiation 10 43200 > th dose dependent rect. 17 14
26 371.03 radiation 1 270 < th dose dependent rect. 20 17
27 371.04 radiation 30 43200 > th dose dependent rect. 7 2
48 371.31 temperature 20 10 > th dose dependent rect. 19 16
49 371.33 radiation 1 270 < th dose dependent rect. 20 14
51 371.35 radiation 10 43200 > th dose dependent rect. 5 2
78 371.42 radiation 40 43200 < th dose independent rect. 16 18
79 371.44 radiation 1 270 < th dose dependent rect. 20 11
80 371.45 radiation 40 43200 < th dose independent rect. 7 3
82 371.45 radiation 40 43200 < th dose independent rect. 5 5
83 371.45 radiation 40 43200 < th dose independent rect. 20 14
91 371.47 radiation 40 43200 < th dose independent rect. 22 12
102 371.58 temperature 20 10 > th dose dependent rect. 2 9
104 371.63 radiation 40 43200 < th dose independent sin 11 NA
107 371.72 radiation 30 43200 > th dose independent rect. 7 1
124 371.77 radiation 20 43200 < th dose independent rect. 19 11
129 371.87 radiation 30 43200 > th dose dependent rect. 14 19
133 371.92 radiation 30 43200 < th dose dependent rect. 18 13
141 372.04 radiation 40 43200 < th dose independent rect. 13 20
142 372.06 radiation 20 43200 < th dose independent rect. 17 15
163 372.08 radiation 20 43200 < th dose independent rect. 5 3
164 372.08 radiation 20 43200 < th dose independent rect. 3 5
165 372.08 radiation 40 43200 > th dose dependent sin 12 NA
169 372.10 radiation 20 43200 < th dose independent rect. 22 10
234 372.32 radiation 40 43200 < th dose dependent rect. 5 1
247 372.39 wind 7 10 < th dose independent rect. 6 17
289 372.52 radiation 30 43200 < th dose dependent rect. 20 11
290 372.53 radiation 30 43200 < th dose dependent rect. 3 4
298 372.55 humidity 90 43200 > th dose dependent rect. 24 1
315 372.61 humidity 50 270 > th dose independent rect. 8 9
336 372.68 humidity 60 14400 > th dose independent rect. 20 4
344 372.72 wind 7 270 < th dose independent rect. 4 16
360 372.86 wind 7 43200 < th dose independent rect. 14 1
385 372.88 radiation 40 43200 < th dose dependent rect. 16 16
387 372.90 temperature 20 270 > th dose independent rect. 4 16
477 373.05 radiation 30 43200 > th dose dependent rect. 14 2
481 373.06 radiation 30 43200 < th dose independent rect. 14 1
482 373.06 radiation 40 43200 < th dose independent rect. 7 17
485 373.07 radiation 40 43200 < th dose independent no NA NA
486 373.07 radiation 40 43200 < th dose independent rect. 7 10
536 373.07 radiation 40 43200 < th dose independent rect. 20 21
556 373.07 radiation 40 43200 < th dose independent rect. 22 23
615 373.09 radiation 30 43200 < th dose independent rect. 14 10
617 373.10 humidity 90 43200 > th dose independent rect. 23 1
619 373.10 radiation 30 43200 < th dose independent rect. 14 7
642 373.11 radiation 30 43200 < th dose independent rect. 14 3
651 373.11 radiation 30 43200 < th dose independent rect. 14 14
712 373.15 wind 7 43200 > th dose independent rect. 14 1
740 373.20 radiation 40 14400 < th dose independent rect. 16 8
812 373.27 atmosphere 1000 10 > th dose independent rect. 19 16
872 373.38 humidity 50 270 > th dose independent rect. 21 20
875 373.38 radiation 40 43200 > th dose dependent no NA NA
876 373.38 radiation 40 43200 > th dose dependent rect. 8 8