BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0682700 Os07g0682700|AK065098
         (463 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0682700  Similar to Chitin-binding lectin 1 precursor (...   763   0.0  

>Os07g0682700 Similar to Chitin-binding lectin 1 precursor (PL-I)
          Length = 463

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/463 (82%), Positives = 381/463 (82%)

Query: 1   MAAPAXXXXXXXXXXXXXXNPHPYGGGYDIFATYGSPIPPSPTTCYXXXXXXXXXXXXXX 60
           MAAPA              NPHPYGGGYDIFATYGSPIPPSPTTCY              
Sbjct: 1   MAAPADDYYGDDDDEYDDYNPHPYGGGYDIFATYGSPIPPSPTTCYPVSSAAPTAPPPKP 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPYYWPKPYDYGDAPREQPAY 120
                                                  EPYYWPKPYDYGDAPREQPAY
Sbjct: 61  SPTPPPASPPPAPTPPQTRPPSPPPQQQQPRPVSPPPVAEPYYWPKPYDYGDAPREQPAY 120

Query: 121 ATPEVFRGWPFFAGARCHSRCGGRDYWRQFMRGLDYLFGHADGYGERRIGVDYHGVPVYA 180
           ATPEVFRGWPFFAGARCHSRCGGRDYWRQFMRGLDYLFGHADGYGERRIGVDYHGVPVYA
Sbjct: 121 ATPEVFRGWPFFAGARCHSRCGGRDYWRQFMRGLDYLFGHADGYGERRIGVDYHGVPVYA 180

Query: 181 NRKGGVEEAVVIQVEPPATGTVEWHHAADDPEYNYNNGNRLSWDDNAKDETYAYVQHNXX 240
           NRKGGVEEAVVIQVEPPATGTVEWHHAADDPEYNYNNGNRLSWDDNAKDETYAYVQHN  
Sbjct: 181 NRKGGVEEAVVIQVEPPATGTVEWHHAADDPEYNYNNGNRLSWDDNAKDETYAYVQHNYS 240

Query: 241 XXXXXXXXXXXXXAVSDETTWFPNQNYQHVYKEEESQYQEILSSSCAESKISAQPIYCYN 300
                        AVSDETTWFPNQNYQHVYKEEESQYQEILSSSCAESKISAQPIYCYN
Sbjct: 241 SYDRSYDQSYSLDAVSDETTWFPNQNYQHVYKEEESQYQEILSSSCAESKISAQPIYCYN 300

Query: 301 QQFSEQPLHVLVEPPETVYSQKLEYYESFSTYNHHNSNDDSDMLGHSYDIQLPDEHVPDE 360
           QQFSEQPLHVLVEPPETVYSQKLEYYESFSTYNHHNSNDDSDMLGHSYDIQLPDEHVPDE
Sbjct: 301 QQFSEQPLHVLVEPPETVYSQKLEYYESFSTYNHHNSNDDSDMLGHSYDIQLPDEHVPDE 360

Query: 361 PFEPIKPSWAMHSGYYQSCTDGASAEFENHTLSSSEFSGIASLFATSFYPQQTQIYECHG 420
           PFEPIKPSWAMHSGYYQSCTDGASAEFENHTLSSSEFSGIASLFATSFYPQQTQIYECHG
Sbjct: 361 PFEPIKPSWAMHSGYYQSCTDGASAEFENHTLSSSEFSGIASLFATSFYPQQTQIYECHG 420

Query: 421 DENVSLQQNWQCNWNVVSENDFQSGYDSNHMNGSFWPFGDHSA 463
           DENVSLQQNWQCNWNVVSENDFQSGYDSNHMNGSFWPFGDHSA
Sbjct: 421 DENVSLQQNWQCNWNVVSENDFQSGYDSNHMNGSFWPFGDHSA 463



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.315    0.133    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,454,774
Number of extensions: 711951
Number of successful extensions: 1163
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 1163
Number of HSP's successfully gapped: 2
Length of query: 463
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 359
Effective length of database: 11,605,545
Effective search space: 4166390655
Effective search space used: 4166390655
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 158 (65.5 bits)