Os07g0682700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chitin-binding lectin 1 precursor (PL-I).
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Os07g0682700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chitin-binding lectin 1 precursor (PL-I).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 176.35 | 0.624 | 9.2 | 0.245 | 2.72 | 3.21 | -0.333 | 3.59 | 0.00986 | 21.8 | 0.1746 | 1432 | -- | -- |
| 181.49 | 0.627 | 9.19 | 0.542 | 3.09 | 2.46 | -0.409 | -- | 0.00109 | 21.9 | 0.17 | 1359 | -- | -- |
| 176.06 | 0.618 | 9.2 | 0.266 | 2.86 | 3.26 | -- | 3.65 | 0.0122 | 21.9 | 0.17 | 1412 | -- | -- |
| 182.06 | 0.628 | 9.19 | 0.543 | 3.08 | 2.44 | -- | -- | -0.0053 | 21.9 | 0.17 | 1359 | -- | -- |
| 361.47 | 0.89 | 9.12 | 0.00743 | -- | 1.65 | -- | -0.897 | -0.194 | -- | 0.963 | 1556 | -- | -- |
| 240.55 | 0.727 | 9.19 | -0.113 | 2.65 | -- | -0.612 | -- | -0.212 | 21.7 | -- | -- | -- | -- |
| 241.97 | 0.728 | 9.19 | -0.09 | 2.66 | -- | -- | -- | -0.211 | 21.7 | -- | -- | -- | -- |
| 360.61 | 0.888 | 9.12 | -0.0215 | -- | 1.67 | -- | -- | -0.188 | -- | 1.5 | 1583 | -- | -- |
| 188.64 | 0.64 | 9.17 | -- | 3.18 | 2.26 | -- | -- | -0.0393 | 21.9 | 0.1781 | 1331 | -- | -- |
| 661.78 | 1.2 | 9.12 | -0.0653 | -- | -- | -- | -- | -0.214 | -- | -- | -- | -- | -- |
| 242.19 | 0.728 | 9.19 | -- | 2.66 | -- | -- | -- | -0.201 | 21.7 | -- | -- | -- | -- |
| 359.12 | 0.885 | 9.12 | -- | -- | 1.67 | -- | -- | -0.182 | -- | 1.68 | 1580 | -- | -- |
| 661.9 | 1.2 | 9.12 | -- | -- | -- | -- | -- | -0.207 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 180.84 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 2 | 181.81 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 3 | 181.83 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 21 |
| 12 | 182.39 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 14 | 182.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 13 |
| 18 | 182.51 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 37 | 182.93 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 39 | 183.01 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 42 | 183.07 | wind | 7 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 44 | 183.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 17 |
| 48 | 183.15 | wind | 7 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 81 | 183.26 | radiation | 1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 96 | 183.31 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 109 | 183.45 | wind | 7 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 127 | 183.62 | wind | 7 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 165 | 183.87 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 167 | 183.88 | wind | 7 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 168 | 183.88 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 18 | 8 |
| 169 | 183.88 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 180 | 183.91 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 234 | 184.11 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 237 | 184.12 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 13 | NA |
| 271 | 184.28 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 295 | 184.39 | radiation | 1 | 1440 | < th | dose dependent | sin | 1 | NA |
| 303 | 184.42 | wind | 7 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 314 | 184.44 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 1 | 4 |
| 347 | 184.53 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 389 | 184.63 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 426 | 184.71 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 430 | 184.72 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 435 | 184.74 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 507 | 184.90 | atmosphere | 1005 | 14400 | > th | dose dependent | no | NA | NA |
| 523 | 184.93 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 1 | 23 |
| 524 | 184.93 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 531 | 184.94 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 675 | 185.29 | radiation | 1 | 1440 | < th | dose dependent | sin | 14 | NA |
| 678 | 185.31 | wind | 7 | 14400 | > th | dose dependent | sin | 1 | NA |
| 703 | 185.37 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 779 | 185.58 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 798 | 185.63 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 848 | 185.78 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 958 | 186.15 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 990 | 186.26 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 17 |