BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0637500 Os07g0637500|Os07g0637500
         (645 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0637500  Protein kinase domain containing protein           1156   0.0  

>Os07g0637500 Protein kinase domain containing protein
          Length = 645

 Score = 1156 bits (2991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/645 (87%), Positives = 567/645 (87%)

Query: 1   MAREAAAPGRTXXXXXXXXXXXXXXXXXXXXDLWSEIMASXXXXXXXXXXXXXXXXXXXQ 60
           MAREAAAPGRT                    DLWSEIMAS                   Q
Sbjct: 1   MAREAAAPGRTAGKASAPSGHHHAGARGGGGDLWSEIMASGGGGGAARIGVVYGRRRAAQ 60

Query: 61  EASRPRGAVDVRGVAAGEKRASFEPSKRTSWNRSLSIRGRESILFAPGTKIQPQQNPCRA 120
           EASRPRGAVDVRGVAAGEKRASFEPSKRTSWNRSLSIRGRESILFAPGTKIQPQQNPCRA
Sbjct: 61  EASRPRGAVDVRGVAAGEKRASFEPSKRTSWNRSLSIRGRESILFAPGTKIQPQQNPCRA 120

Query: 121 QKRPPKPGNRVKRTFGGPPDLKKEKAYFEEVDAFELMEESPSPKNFGTWARGMEQNYIVH 180
           QKRPPKPGNRVKRTFGGPPDLKKEKAYFEEVDAFELMEESPSPKNFGTWARGMEQNYIVH
Sbjct: 121 QKRPPKPGNRVKRTFGGPPDLKKEKAYFEEVDAFELMEESPSPKNFGTWARGMEQNYIVH 180

Query: 181 DLSAILERWKISKLAKFAASRPLFDIMETPVVPSVRSDCSLHDSCRTPEKDRGSRTNPMR 240
           DLSAILERWKISKLAKFAASRPLFDIMETPVVPSVRSDCSLHDSCRTPEKDRGSRTNPMR
Sbjct: 181 DLSAILERWKISKLAKFAASRPLFDIMETPVVPSVRSDCSLHDSCRTPEKDRGSRTNPMR 240

Query: 241 RTIPSGLSDKTSIFTSFSELKIKEEPDDSSIPSLSAEAMTAFAQLLLVCNQSAPITLAEA 300
           RTIPSGLSDKTSIFTSFSELKIKEEPDDSSIPSLSAEAMTAFAQLLLVCNQSAPITLAEA
Sbjct: 241 RTIPSGLSDKTSIFTSFSELKIKEEPDDSSIPSLSAEAMTAFAQLLLVCNQSAPITLAEA 300

Query: 301 FSTYCLYSSFNEDVHGNSTPGSIVKLGEGTFGEAFRAGSTVCKVVPFDGTSLVNGETQKK 360
           FSTYCLYSSFNEDVHGNSTPGSIVKLGEGTFGEAFRAGSTVCKVVPFDGTSLVNGETQKK
Sbjct: 301 FSTYCLYSSFNEDVHGNSTPGSIVKLGEGTFGEAFRAGSTVCKVVPFDGTSLVNGETQKK 360

Query: 361 AXXXXXXXXXXXXXXXXRADRGDNVKENSCHGFIETKDFWVCQGPYDPSLICAWEDWDAK 420
           A                RADRGDNVKENSCHGFIETKDFWVCQGPYDPSLICAWEDWDAK
Sbjct: 361 AEEVLEEVLLCLTLNNLRADRGDNVKENSCHGFIETKDFWVCQGPYDPSLICAWEDWDAK 420

Query: 421 CCSENDHPNDFSNEQCYIVFVQADGGRDLEKFALLDYNEACSXXXXXXXXXXXXESACEF 480
           CCSENDHPNDFSNEQCYIVFVQADGGRDLEKFALLDYNEACS            ESACEF
Sbjct: 421 CCSENDHPNDFSNEQCYIVFVQADGGRDLEKFALLDYNEACSLLVQVTAALAVAESACEF 480

Query: 481 EHRDLHWGNILLDRDETQDKNHTMGFTLQGKNMCTRTFGLNVSIIDFTLSRINTGDAILF 540
           EHRDLHWGNILLDRDETQDKNHTMGFTLQGKNMCTRTFGLNVSIIDFTLSRINTGDAILF
Sbjct: 481 EHRDLHWGNILLDRDETQDKNHTMGFTLQGKNMCTRTFGLNVSIIDFTLSRINTGDAILF 540

Query: 541 LDLSTDPALFEGPKRDKQAETYRKMKQITNDYWEGSFPKTNVVWLIYLVDIVLQKRYSTF 600
           LDLSTDPALFEGPKRDKQAETYRKMKQITNDYWEGSFPKTNVVWLIYLVDIVLQKRYSTF
Sbjct: 541 LDLSTDPALFEGPKRDKQAETYRKMKQITNDYWEGSFPKTNVVWLIYLVDIVLQKRYSTF 600

Query: 601 TSKDDRELRAFKKRLAKYDSAKDCLTXXXXXXXXXXXEDAQPSTA 645
           TSKDDRELRAFKKRLAKYDSAKDCLT           EDAQPSTA
Sbjct: 601 TSKDDRELRAFKKRLAKYDSAKDCLTDSFFSDLLLSDEDAQPSTA 645



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.132    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,905,267
Number of extensions: 879372
Number of successful extensions: 2155
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2152
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 538
Effective length of database: 11,448,903
Effective search space: 6159509814
Effective search space used: 6159509814
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)