BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0626600 Os07g0626600|Os07g0626600
         (450 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0626600  Similar to Embryogenic callus protein-like          781   0.0  
AK110329                                                          275   4e-74

>Os07g0626600 Similar to Embryogenic callus protein-like
          Length = 450

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/407 (93%), Positives = 380/407 (93%)

Query: 44  VERRLRXXXXXXXXXXHLPLEVGTRVMCRWRDQKLHPVKVIERRKSSTSSSPADYEYYVH 103
           VERRLR          HLPLEVGTRVMCRWRDQKLHPVKVIERRKSSTSSSPADYEYYVH
Sbjct: 44  VERRLRSSAASASWASHLPLEVGTRVMCRWRDQKLHPVKVIERRKSSTSSSPADYEYYVH 103

Query: 104 YTEFNRRLDEWVKLEQXXXXXXXXXXXXXXXXXATSLKMTRHQKRKIDETHVEQGHEELD 163
           YTEFNRRLDEWVKLEQ                 ATSLKMTRHQKRKIDETHVEQGHEELD
Sbjct: 104 YTEFNRRLDEWVKLEQLDLETVETDVDEKVEDKATSLKMTRHQKRKIDETHVEQGHEELD 163

Query: 164 AASLREHEEFTKVKNIAKIELGRYEIDTWYFSPFPPEYNDSPKLFFCEFCLNFMKRKEQL 223
           AASLREHEEFTKVKNIAKIELGRYEIDTWYFSPFPPEYNDSPKLFFCEFCLNFMKRKEQL
Sbjct: 164 AASLREHEEFTKVKNIAKIELGRYEIDTWYFSPFPPEYNDSPKLFFCEFCLNFMKRKEQL 223

Query: 224 QRHMKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLF 283
           QRHMKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLF
Sbjct: 224 QRHMKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLF 283

Query: 284 LFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKE 343
           LFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKE
Sbjct: 284 LFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKE 343

Query: 344 GKVGTPERPLSDLGLLSYRGYWTRVLLEILKKHKSNISIKELSDMTAIKADDILSTLQSL 403
           GKVGTPERPLSDLGLLSYRGYWTRVLLEILKKHKSNISIKELSDMTAIKADDILSTLQSL
Sbjct: 344 GKVGTPERPLSDLGLLSYRGYWTRVLLEILKKHKSNISIKELSDMTAIKADDILSTLQSL 403

Query: 404 DLIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQG 450
           DLIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQG
Sbjct: 404 DLIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQG 450



>AK110329 
          Length = 784

 Score =  275 bits (704), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 140/283 (49%), Positives = 180/283 (63%), Gaps = 3/283 (1%)

Query: 167 LREHEEFTKVKNIAKIELGRYEIDTWYFSPFPPEYNDSPKLFFCEFCLNFMKRKEQLQRH 226
           +R H++      I  I  G +EIDTW+ +P+P EY+ +  L+ CEFCL +M       RH
Sbjct: 208 VRSHKQAATASKIKCINFGGWEIDTWHAAPYPEEYSKNRVLYICEFCLKYMNSDYVAWRH 267

Query: 227 MKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFY 286
             K   KHPPGDEIYR G  S FEVDG+KN VY QNLC LAKLFL  KTLYYDV+ FLFY
Sbjct: 268 KLKRPAKHPPGDEIYRDGKYSFFEVDGRKNPVYCQNLCLLAKLFLGSKTLYYDVEPFLFY 327

Query: 287 VLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKV 346
           V+ E D  GCH VGYFSKEK      N++CIL LP + RKGYG++L+ FSY L++ E K 
Sbjct: 328 VMTENDQFGCHFVGYFSKEKRPSSLNNVSCILVLPIHMRKGYGQYLMEFSYLLTRVERKT 387

Query: 347 GTPERPLSDLGLLSYRGYWTRVLLEILKKHKSNISIKELSDMTAIKADDILSTLQSLDLI 406
           G+PE+PLSD+GL+SYR YW  VL E L   KS ISI  +SD T + ADDI+STL+ L  +
Sbjct: 388 GSPEKPLSDMGLVSYRKYWRLVLCEELLNQKSPISISAISDRTGMTADDIISTLEGLRAL 447

Query: 407 --QYRKGQHVICADPKVLDRHL-KAAGRGGLEVDVSKLIWTPY 446
                  ++ +  D +    ++ K    G  ++    L+WTPY
Sbjct: 448 VRDPVTKKYALRLDLEYFKSYIDKCNAAGNPKIKPECLVWTPY 490



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,675,861
Number of extensions: 550500
Number of successful extensions: 1049
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1048
Number of HSP's successfully gapped: 2
Length of query: 450
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 346
Effective length of database: 11,605,545
Effective search space: 4015518570
Effective search space used: 4015518570
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)