BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0472500 Os07g0472500|AK066964
         (795 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0472500  Similar to Myosin heavy chain-like protein (Fr...  1233   0.0  

>Os07g0472500 Similar to Myosin heavy chain-like protein (Fragment)
          Length = 795

 Score = 1233 bits (3189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/722 (87%), Positives = 631/722 (87%)

Query: 74  VVMELGFQNDYLKSQIXXXXXXXXXXXXXLVKGLKEQVERLRKEVEEHKQTQKATEAALE 133
           VVMELGFQNDYLKSQI             LVKGLKEQVERLRKEVEEHKQTQKATEAALE
Sbjct: 74  VVMELGFQNDYLKSQIAAAEGGSGAAESELVKGLKEQVERLRKEVEEHKQTQKATEAALE 133

Query: 134 HVNVAYAEADAKVQDLTAKLTQAQQKMDKELKERDEKYVELDTKFQRLHKRAKQRIQDIQ 193
           HVNVAYAEADAKVQDLTAKLTQAQQKMDKELKERDEKYVELDTKFQRLHKRAKQRIQDIQ
Sbjct: 134 HVNVAYAEADAKVQDLTAKLTQAQQKMDKELKERDEKYVELDTKFQRLHKRAKQRIQDIQ 193

Query: 194 KEKDDMEARFNEINQKXXXXXXXXXXXXXXXXXXXXXXXXXLRSMDAERQQLRTVNSKLR 253
           KEKDDMEARFNEINQK                         LRSMDAERQQLRTVNSKLR
Sbjct: 194 KEKDDMEARFNEINQKAEQASSLQSAAQQELERARQQASEALRSMDAERQQLRTVNSKLR 253

Query: 254 TNLDEARVALEARNNVLEKLRQSMFEKEQLLEQTQASLQSAEEKRNASIAELTAKHQKQL 313
           TNLDEARVALEARNNVLEKLRQSMFEKEQLLEQTQASLQSAEEKRNASIAELTAKHQKQL
Sbjct: 254 TNLDEARVALEARNNVLEKLRQSMFEKEQLLEQTQASLQSAEEKRNASIAELTAKHQKQL 313

Query: 314 ESLEAQLTEVSAERTKASETIQSLQMLLVEKDSEIAEIEAASTGEAARIRAAMEELKGEL 373
           ESLEAQLTEVSAERTKASETIQSLQMLLVEKDSEIAEIEAASTGEAARIRAAMEELKGEL
Sbjct: 314 ESLEAQLTEVSAERTKASETIQSLQMLLVEKDSEIAEIEAASTGEAARIRAAMEELKGEL 373

Query: 374 AHLKDQHEKERQNWETTCESLRTKLEASESACHISVIESTKVKSQLELELSKQNQLLQTK 433
           AHLKDQHEKERQNWETTCESLRTKLEASESACHISVIESTKVKSQLELELSKQNQLLQTK
Sbjct: 374 AHLKDQHEKERQNWETTCESLRTKLEASESACHISVIESTKVKSQLELELSKQNQLLQTK 433

Query: 434 DSDLLAAKDEISRLESEFSAYKVRAHALLQKKDAELNTAKNSDLIKAHEEAIREAEKEIS 493
           DSDLLAAKDEISRLESEFSAYKVRAHALLQKKDAELNTAKNSDLIKAHEEAIREAEKEIS
Sbjct: 434 DSDLLAAKDEISRLESEFSAYKVRAHALLQKKDAELNTAKNSDLIKAHEEAIREAEKEIS 493

Query: 494 AALAERDKAIHDLQIAQSKYGEEIEARDLALADSDKKLKNVMAKLDSLTSKFLSEKESWE 553
           AALAERDKAIHDLQIAQSKYGEEIEARDLALADSDKKLKNVMAKLDSLTSKFLSEKESWE
Sbjct: 494 AALAERDKAIHDLQIAQSKYGEEIEARDLALADSDKKLKNVMAKLDSLTSKFLSEKESWE 553

Query: 554 KNVASVEESWRLKCESVKAESNGHAGDELKKNLVELTVKHEKLKEEHDSFRDIADRMLEE 613
           KNVASVEESWRLKCESVKAESNGHAGDELKKNLVELTVKHEKLKEEHDSFRDIADRMLEE
Sbjct: 554 KNVASVEESWRLKCESVKAESNGHAGDELKKNLVELTVKHEKLKEEHDSFRDIADRMLEE 613

Query: 614 KDREVAKLLRENKDLHNSLEAKAAVSINGNQNPGPAKQDAMDXXXXXXXXXXXXXXXXXX 673
           KDREVAKLLRENKDLHNSLEAKAAVSINGNQNPGPAKQDAMD                  
Sbjct: 614 KDREVAKLLRENKDLHNSLEAKAAVSINGNQNPGPAKQDAMDIELAEQQILLLARQQAQR 673

Query: 674 XXXXXXSQRHXXXXXXXXXXXXXXXXXHDQQEAMLKTELRNMERSQKREGIDMTYLKNVI 733
                 SQRH                 HDQQEAMLKTELRNMERSQKREGIDMTYLKNVI
Sbjct: 674 EEELAQSQRHILALQQEIEELERENRLHDQQEAMLKTELRNMERSQKREGIDMTYLKNVI 733

Query: 734 LKLLETGEVGALLPVVATLLQFSPEELTKCQHGVLXXXXXXXXXXXXDGGSTPNSFFSRF 793
           LKLLETGEVGALLPVVATLLQFSPEELTKCQHGVL            DGGSTPNSFFSRF
Sbjct: 734 LKLLETGEVGALLPVVATLLQFSPEELTKCQHGVLSAVASSPATAVPDGGSTPNSFFSRF 793

Query: 794 TF 795
           TF
Sbjct: 794 TF 795



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.308    0.123    0.317 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,602,124
Number of extensions: 569216
Number of successful extensions: 4403
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 4397
Number of HSP's successfully gapped: 12
Length of query: 795
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 686
Effective length of database: 11,344,475
Effective search space: 7782309850
Effective search space used: 7782309850
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 160 (66.2 bits)