BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0436000 Os07g0436000|J100053D01
         (548 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0436000  Ankyrin repeat containing protein                   987   0.0  
Os07g0512100  Ankyrin repeat containing protein                   254   1e-67

>Os07g0436000 Ankyrin repeat containing protein
          Length = 548

 Score =  987 bits (2552), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/548 (89%), Positives = 488/548 (89%)

Query: 1   MAGVDAARYAHSEAHHAVATRDHAALRRVLDALPRARRPEEIRTXXXXXXXXXXXXXXXX 60
           MAGVDAARYAHSEAHHAVATRDHAALRRVLDALPRARRPEEIRT                
Sbjct: 1   MAGVDAARYAHSEAHHAVATRDHAALRRVLDALPRARRPEEIRTEADSVAEEARAEAASA 60

Query: 61  XXXXRDVPGRETPLHLAVRXXXXXXXXXXXXXXXXWSLQNEQGWSALQEAICAREEALAR 120
               RDVPGRETPLHLAVR                WSLQNEQGWSALQEAICAREEALAR
Sbjct: 61  VIDRRDVPGRETPLHLAVRLGDAAAAEMLMAAGADWSLQNEQGWSALQEAICAREEALAR 120

Query: 121 VIVRHYQPLAWAKWCRRLPRVVAAMRRMRDFYMEITFHFESSVIPFISRIAPSDTYRVWK 180
           VIVRHYQPLAWAKWCRRLPRVVAAMRRMRDFYMEITFHFESSVIPFISRIAPSDTYRVWK
Sbjct: 121 VIVRHYQPLAWAKWCRRLPRVVAAMRRMRDFYMEITFHFESSVIPFISRIAPSDTYRVWK 180

Query: 181 RGANLRADMTLAGFDGFKIQRSDQTILFLGEGSDDGKVPPGSLCMINHKDKEVMNALEGS 240
           RGANLRADMTLAGFDGFKIQRSDQTILFLGEGSDDGKVPPGSLCMINHKDKEVMNALEGS
Sbjct: 181 RGANLRADMTLAGFDGFKIQRSDQTILFLGEGSDDGKVPPGSLCMINHKDKEVMNALEGS 240

Query: 241 GAPASEAEVQQEVTAMSQTNIFRPGIDVTQAVLLPQLTWRRQERTESVGPWKAKVYDMHH 300
           GAPASEAEVQQEVTAMSQTNIFRPGIDVTQAVLLPQLTWRRQERTESVGPWKAKVYDMHH
Sbjct: 241 GAPASEAEVQQEVTAMSQTNIFRPGIDVTQAVLLPQLTWRRQERTESVGPWKAKVYDMHH 300

Query: 301 VMVSVKSRRVPGAMTDEEFFSACNENDTESEGFDDVLTXXXXXXXXXXXXMDSPDGAGGE 360
           VMVSVKSRRVPGAMTDEEFFSACNENDTESEGFDDVLT            MDSPDGAGGE
Sbjct: 301 VMVSVKSRRVPGAMTDEEFFSACNENDTESEGFDDVLTEEEKKQLEAALKMDSPDGAGGE 360

Query: 361 GQSDTFVGPRHSCVEPREREIPIEDLSISGNGDSKHDKKGWFGHWGKRVQSSKLEGTKKM 420
           GQSDTFVGPRHSCVEPREREIPIEDLSISGNGDSKHDKKGWFGHWGKRVQSSKLEGTKKM
Sbjct: 361 GQSDTFVGPRHSCVEPREREIPIEDLSISGNGDSKHDKKGWFGHWGKRVQSSKLEGTKKM 420

Query: 421 APPRSSLCVDEKVSDILIESPSNVQTRPGRHSVDVVRGDESRRGKERDYRRPAASSECGH 480
           APPRSSLCVDEKVSDILIESPSNVQTRPGRHSVDVVRGDESRRGKERDYRRPAASSECGH
Sbjct: 421 APPRSSLCVDEKVSDILIESPSNVQTRPGRHSVDVVRGDESRRGKERDYRRPAASSECGH 480

Query: 481 RRXXXXXXXXXXXXLRPVLWLSPNFPLRTEELLPLLDILANKVKAIRRLRDLLTTKLPPG 540
           RR            LRPVLWLSPNFPLRTEELLPLLDILANKVKAIRRLRDLLTTKLPPG
Sbjct: 481 RRKEGSKESEYKKGLRPVLWLSPNFPLRTEELLPLLDILANKVKAIRRLRDLLTTKLPPG 540

Query: 541 TFPVKVLA 548
           TFPVKVLA
Sbjct: 541 TFPVKVLA 548



>Os07g0512100 Ankyrin repeat containing protein
          Length = 621

 Score =  254 bits (649), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 136/307 (44%), Positives = 185/307 (60%), Gaps = 8/307 (2%)

Query: 9   YAHSEAHHAVATRDHAALRRVLDALPRARRPEEIRTXXXXXXXXXXXXXXXXXXXXRDVP 68
           Y HS AHH VA RD A L  VL  LP    P  I T                    RDVP
Sbjct: 29  YTHSPAHHRVALRDAAGLAGVLHGLPPLAHPSRILTAADAAREARLAASVSGALDRRDVP 88

Query: 69  GRETPLHLAVRXXXXXXXXXXXXXXXXWSLQNEQGWSALQEAICAREEALARVIVRHYQP 128
           G +T LHLAVR                 +LQN  GW+ LQEA+C   + +A  ++R ++ 
Sbjct: 89  GGDTALHLAVRLRLPSLASALAAAGADPTLQNHAGWTPLQEALCLGCKDIAACLLRAHRL 148

Query: 129 LAWAKWCRRLPRVVAAMRRMRDFYMEITFHFESSVIPFISRIAPSDTYRVWKRGANLRAD 188
            AWAK  RR P + AA+RR++DFY+E+ FHFESSV+P +SR APSDTYR+WKRGA LRAD
Sbjct: 149 AAWAKLRRRAPALSAALRRVQDFYLEVDFHFESSVVPLLSRAAPSDTYRIWKRGAELRAD 208

Query: 189 MTLAGFDGFKIQRSDQTILFLGEGSDDG--KVPPGSLCMINHKDKEVMNALEGSGAPASE 246
            TLAGFDG +I+R+D + LF GE +D G   +PPGSL +++   +EV +A        + 
Sbjct: 209 TTLAGFDGLRIRRADHSFLFFGEEADAGGRHLPPGSLLVLHRGKREVHDAFA------AA 262

Query: 247 AEVQQEVTAMSQTNIFRPGIDVTQAVLLPQLTWRRQERTESVGPWKAKVYDMHHVMVSVK 306
           A    E +A S    +RPG++++ A L+P+ TW R+E+TESVG WKA+V+D+H+V+ S +
Sbjct: 263 AAAGDEDSATSDAAAYRPGLNISSARLVPRTTWLRKEKTESVGEWKARVFDVHNVVFSFR 322

Query: 307 SRRVPGA 313
           + +   A
Sbjct: 323 TLKAANA 329




 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/52 (71%), Positives = 46/52 (88%)

Query: 495 LRPVLWLSPNFPLRTEELLPLLDILANKVKAIRRLRDLLTTKLPPGTFPVKV 546
           LRP +WL+ +FPL  +E LPLLDILA++V+A+RRLR+LLTTK PPGTFPVKV
Sbjct: 448 LRPTVWLTEDFPLTVDEFLPLLDILASRVRAVRRLRELLTTKFPPGTFPVKV 499



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.134    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,449,690
Number of extensions: 760549
Number of successful extensions: 1862
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1856
Number of HSP's successfully gapped: 3
Length of query: 548
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 442
Effective length of database: 11,501,117
Effective search space: 5083493714
Effective search space used: 5083493714
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)