Os07g0436000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os07g0436000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.3 | 0.371 | 6.9 | 0.437 | 0.197 | 5.9 | 0.703 | -18.9 | 0.055 | 18 | 0.2826 | 83 | -- | -- |
| 65.41 | 0.377 | 6.84 | 0.545 | 0.124 | 1.18 | 0.665 | -- | 0.0299 | 19.1 | 1.5 | 53 | -- | -- |
| 63.24 | 0.37 | 6.9 | 0.426 | 0.209 | 6.11 | -- | -19.2 | 0.0596 | 16.8 | 0.4781 | 99 | -- | -- |
| 65.51 | 0.377 | 6.86 | 0.545 | 0.189 | 0.865 | -- | -- | 0.0431 | 16.6 | 0.996 | 160 | -- | -- |
| 65.55 | 0.377 | 6.9 | 0.419 | -- | 5.96 | -- | -18.4 | 0.0541 | -- | 0.37 | 99 | -- | -- |
| 65.84 | 0.38 | 6.86 | 0.569 | 0.19 | -- | 0.825 | -- | 0.0376 | 18.1 | -- | -- | -- | -- |
| 67.17 | 0.384 | 6.86 | 0.563 | 0.208 | -- | -- | -- | 0.0417 | 16.7 | -- | -- | -- | -- |
| 67.29 | 0.382 | 6.86 | 0.519 | -- | 0.715 | -- | -- | 0.0494 | -- | 1 | 295 | -- | -- |
| 70.95 | 0.392 | 6.87 | -- | 0.213 | 0.81 | -- | -- | 0.00512 | 16.3 | 0.7665 | 799 | -- | -- |
| 69.48 | 0.389 | 6.86 | 0.555 | -- | -- | -- | -- | 0.0363 | -- | -- | -- | -- | -- |
| 75.53 | 0.407 | 6.87 | -- | 0.198 | -- | -- | -- | -0.021 | 16.8 | -- | -- | -- | -- |
| 72.9 | 0.398 | 6.86 | -- | -- | 0.545 | -- | -- | 0.0109 | -- | 1.355 | 1623 | -- | -- |
| 77.61 | 0.411 | 6.87 | -- | -- | -- | -- | -- | -0.0253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.63 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 4 | 58.89 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 10 | 59.11 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 30 | 59.51 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 34 | 59.59 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 37 | 59.74 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 46 | 59.94 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 47 | 59.96 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 54 | 60.06 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 2 | 3 |
| 56 | 60.10 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 3 |
| 57 | 60.11 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 69 | 60.21 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 80 | 60.35 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 82 | 60.35 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 83 | 60.37 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 17 | 9 |
| 89 | 60.40 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 91 | 60.40 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 16 | 11 |
| 92 | 60.40 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 131 | 60.53 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 18 | 11 |
| 150 | 60.62 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 168 | 60.72 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 21 |
| 190 | 60.84 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 195 | 60.85 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 211 | 60.90 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 14 | 15 |
| 213 | 60.90 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 216 | 60.92 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 19 |
| 222 | 60.93 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 223 | 60.94 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 246 | 61.05 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 8 |
| 251 | 61.07 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 257 | 61.09 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 258 | 61.09 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 21 |
| 271 | 61.13 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 295 | 61.27 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 19 |
| 318 | 61.35 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 20 | 9 |
| 323 | 61.36 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 15 |
| 328 | 61.37 | atmosphere | 1005.0 | 10 | > th | dose independent | sin | 14 | NA |
| 329 | 61.37 | wind | 1.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 338 | 61.39 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 351 | 61.44 | atmosphere | 1005.0 | 270 | > th | dose independent | sin | 12 | NA |
| 367 | 61.47 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 10 | 17 |
| 370 | 61.48 | atmosphere | 1005.0 | 270 | > th | dose independent | sin | 15 | NA |
| 374 | 61.50 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 381 | 61.52 | wind | 9.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 384 | 61.53 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 11 |
| 428 | 61.61 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 439 | 61.63 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 7 |
| 452 | 61.66 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 15 | 16 |
| 464 | 61.68 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 15 |
| 471 | 61.69 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 474 | 61.70 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 495 | 61.74 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 503 | 61.74 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 510 | 61.74 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 512 | 61.74 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 546 | 61.78 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 550 | 61.78 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 575 | 61.81 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 17 | 12 |
| 577 | 61.81 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 18 |
| 581 | 61.81 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 586 | 61.82 | wind | 1.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 587 | 61.82 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 591 | 61.82 | wind | 1.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 606 | 61.84 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 607 | 61.84 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 612 | 61.84 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 19 |
| 636 | 61.88 | precipitation | 0.1 | 90 | > th | dose independent | sin | 12 | NA |
| 637 | 61.88 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 651 | 61.89 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 652 | 61.89 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 656 | 61.89 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 659 | 61.89 | wind | 3.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 665 | 61.90 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 677 | 61.92 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 11 | NA |
| 683 | 61.92 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 684 | 61.93 | atmosphere | 1005.0 | 10 | < th | dose independent | sin | 14 | NA |
| 696 | 61.94 | precipitation | 0.1 | 30 | > th | dose independent | sin | 1 | NA |
| 703 | 61.94 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 721 | 61.95 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 769 | 61.97 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 14 |
| 774 | 61.97 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 14 |
| 776 | 61.98 | wind | 5.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 780 | 61.98 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 13 |
| 784 | 61.98 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 796 | 61.99 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 18 |
| 804 | 62.00 | atmosphere | 1005.0 | 270 | < th | dose independent | sin | 13 | NA |
| 824 | 62.01 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 854 | 62.04 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 861 | 62.04 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 9 | 10 |
| 870 | 62.04 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 9 | 10 |
| 874 | 62.04 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 23 | 17 |
| 886 | 62.06 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 887 | 62.06 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 900 | 62.06 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 20 |
| 901 | 62.06 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 1 | NA |
| 910 | 62.07 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 916 | 62.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 13 |
| 925 | 62.07 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 931 | 62.07 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 7 |
| 933 | 62.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 13 |
| 947 | 62.08 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 965 | 62.09 | wind | 9.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 986 | 62.09 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 994 | 62.10 | atmosphere | 1005.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 999 | 62.10 | radiation | 1.0 | 30 | < th | dose independent | rect. | 18 | 11 |