BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0167100 Os07g0167100|AK063292
         (568 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0167100  Similar to Yarrowia lipolytica chromosome A of...  1123   0.0  
AK108164                                                          154   2e-37

>Os07g0167100 Similar to Yarrowia lipolytica chromosome A of strain CLIB99 of
           Yarrowia lipolytica
          Length = 568

 Score = 1123 bits (2906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/568 (95%), Positives = 542/568 (95%)

Query: 1   SLASETCEELFTANAPRIDLALNGVEVFVNASGSHHQLRKLSLRIDSMRNATLACGGVYM 60
           SLASETCEELFTANAPRIDLALNGVEVFVNASGSHHQLRKLSLRIDSMRNATLACGGVYM
Sbjct: 1   SLASETCEELFTANAPRIDLALNGVEVFVNASGSHHQLRKLSLRIDSMRNATLACGGVYM 60

Query: 61  YANQQGCDGGRLYYDGCCCIAVNGDVVAQGSQFSXXXXXXXXXXXXXXXXSSYRASVSSF 120
           YANQQGCDGGRLYYDGCCCIAVNGDVVAQGSQFS                SSYRASVSSF
Sbjct: 61  YANQQGCDGGRLYYDGCCCIAVNGDVVAQGSQFSLKDVEVLDALVDLDAVSSYRASVSSF 120

Query: 121 REQASHRTKVPFVKVPYKLCKPFQSGMVPTGPVEVMYHRPEEEIAFGPSCWLWDYLRRSR 180
           REQASHRTKVPFVKVPYKLCKPFQSGMVPTGPVEVMYHRPEEEIAFGPSCWLWDYLRRSR
Sbjct: 121 REQASHRTKVPFVKVPYKLCKPFQSGMVPTGPVEVMYHRPEEEIAFGPSCWLWDYLRRSR 180

Query: 181 ASGFLLPLSGGADSSSVAAIVGCMCQLVVKDIENGDEQVKADAMRIGQYKDGEFPKDSRE 240
           ASGFLLPLSGGADSSSVAAIVGCMCQLVVKDIENGDEQVKADAMRIGQYKDGEFPKDSRE
Sbjct: 181 ASGFLLPLSGGADSSSVAAIVGCMCQLVVKDIENGDEQVKADAMRIGQYKDGEFPKDSRE 240

Query: 241 LAKRLFYTVYMGTENSSEGTRSRAKMLAEEIGSFHLDVPIDSIVSALLSLFERLTGKRPR 300
           LAKRLFYTVYMGTENSSEGTRSRAKMLAEEIGSFHLDVPIDSIVSALLSLFERLTGKRPR
Sbjct: 241 LAKRLFYTVYMGTENSSEGTRSRAKMLAEEIGSFHLDVPIDSIVSALLSLFERLTGKRPR 300

Query: 301 YKVDGGSNTENLGLQNIQARIRMVLAFMMASLMPWVHNKSGFYLVLGSSNVDEGLRGYLT 360
           YKVDGGSNTENLGLQNIQARIRMVLAFMMASLMPWVHNKSGFYLVLGSSNVDEGLRGYLT
Sbjct: 301 YKVDGGSNTENLGLQNIQARIRMVLAFMMASLMPWVHNKSGFYLVLGSSNVDEGLRGYLT 360

Query: 361 KYDCSSADINPIGSVSKQDLRAFLRWAAVHLHYSSLAEVEAAPPTAELEPIRADYNQLDE 420
           KYDCSSADINPIGSVSKQDLRAFLRWAAVHLHYSSLAEVEAAPPTAELEPIRADYNQLDE
Sbjct: 361 KYDCSSADINPIGSVSKQDLRAFLRWAAVHLHYSSLAEVEAAPPTAELEPIRADYNQLDE 420

Query: 421 VDMGMTYEELSIYGRLRKIFRCGPVSMFQNLCHRWCGTLSPSEVADKVKHFFKYYAINRH 480
           VDMGMTYEELSIYGRLRKIFRCGPVSMFQNLCHRWCGTLSPSEVADKVKHFFKYYAINRH
Sbjct: 421 VDMGMTYEELSIYGRLRKIFRCGPVSMFQNLCHRWCGTLSPSEVADKVKHFFKYYAINRH 480

Query: 481 KMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVQDMDKDGKWVNSTEGEL 540
           KMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVQDMDKDGKWVNSTEGEL
Sbjct: 481 KMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVQDMDKDGKWVNSTEGEL 540

Query: 541 RRRKGVRSAEXXXXXXXXXXSANPSAGS 568
           RRRKGVRSAE          SANPSAGS
Sbjct: 541 RRRKGVRSAEGGGMGVVAVGSANPSAGS 568



>AK108164 
          Length = 250

 Score =  154 bits (388), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/74 (98%), Positives = 73/74 (98%)

Query: 1   SLASETCEELFTANAPRIDLALNGVEVFVNASGSHHQLRKLSLRIDSMRNATLACGGVYM 60
           SLASETCEELFTANAPRIDLALNGVEVFVNASGSHHQLRKLSLRID MRNATLACGGVYM
Sbjct: 168 SLASETCEELFTANAPRIDLALNGVEVFVNASGSHHQLRKLSLRIDLMRNATLACGGVYM 227

Query: 61  YANQQGCDGGRLYY 74
           YANQQGCDGGRLYY
Sbjct: 228 YANQQGCDGGRLYY 241



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,389,954
Number of extensions: 742353
Number of successful extensions: 1601
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1600
Number of HSP's successfully gapped: 2
Length of query: 568
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 462
Effective length of database: 11,501,117
Effective search space: 5313516054
Effective search space used: 5313516054
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)