BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0724100 Os06g0724100|AK060793
         (525 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0724100  Zinc finger, FYVE/PHD-type domain containing p...   743   0.0  
Os07g0573300  Similar to FYVE finger-containing phosphoinosi...   428   e-120
Os03g0669800  Zinc finger, FYVE-type domain containing protein     70   4e-12

>Os06g0724100 Zinc finger, FYVE/PHD-type domain containing protein
          Length = 525

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/400 (90%), Positives = 361/400 (90%)

Query: 126 SLDRAGSYGYGSGSQELYPPKPAGGGWSDDGVYAYSGGGGDAPEPYGARGTAPRSNSPLF 185
           SLDRAGSYGYGSGSQELYPPKPAGGGWSDDGVYAYSGGGGDAPEPYGARGTAPRSNSPLF
Sbjct: 126 SLDRAGSYGYGSGSQELYPPKPAGGGWSDDGVYAYSGGGGDAPEPYGARGTAPRSNSPLF 185

Query: 186 DDYGRSIGSTKERXXXXXXXXXSSASPKVVRAVPKVETSEDTSGGVQKFRVKLLPEGAGS 245
           DDYGRSIGSTKER         SSASPKVVRAVPKVETSEDTSGGVQKFRVKLLPEGAGS
Sbjct: 186 DDYGRSIGSTKERGGGGGGGGGSSASPKVVRAVPKVETSEDTSGGVQKFRVKLLPEGAGS 245

Query: 246 PMDVLCQVGLDGIRMLDPNTSRTLRIYPLETVTRWDVLDSSIFAFWSKSSVDFEARRIRL 305
           PMDVLCQVGLDGIRMLDPNTSRTLRIYPLETVTRWDVLDSSIFAFWSKSSVDFEARRIRL
Sbjct: 246 PMDVLCQVGLDGIRMLDPNTSRTLRIYPLETVTRWDVLDSSIFAFWSKSSVDFEARRIRL 305

Query: 306 KSNSYTTNTILDTVTAASVQFKEMGGXXXXXXXXXXXXXKPPEQQNDRRKNFLDWRNLMK 365
           KSNSYTTNTILDTVTAASVQFKEMGG             KPPEQQNDRRKNFLDWRNLMK
Sbjct: 306 KSNSYTTNTILDTVTAASVQFKEMGGSSISRSRAIADAAKPPEQQNDRRKNFLDWRNLMK 365

Query: 366 PMNEEKDHWVPDEAVTKCTACTADFSAFNRRHHCRNCGDIFCDKCTQGRTPLTTDADAQP 425
           PMNEEKDHWVPDEAVTKCTACTADFSAFNRRHHCRNCGDIFCDKCTQGRTPLTTDADAQP
Sbjct: 366 PMNEEKDHWVPDEAVTKCTACTADFSAFNRRHHCRNCGDIFCDKCTQGRTPLTTDADAQP 425

Query: 426 VRVCDRCMAEVSQRLNNAREAANRPIVHSHEDLAKKLKDAMDINKKXXXXXXXXXXXXXX 485
           VRVCDRCMAEVSQRLNNAREAANRPIVHSHEDLAKKLKDAMDINKK              
Sbjct: 426 VRVCDRCMAEVSQRLNNAREAANRPIVHSHEDLAKKLKDAMDINKKSSSASSRSTDGSSR 485

Query: 486 XXXEVACPTCTVHLQVQVPTSGSETIECGVCQQPFLVSAR 525
              EVACPTCTVHLQVQVPTSGSETIECGVCQQPFLVSAR
Sbjct: 486 RMREVACPTCTVHLQVQVPTSGSETIECGVCQQPFLVSAR 525



>Os07g0573300 Similar to FYVE finger-containing phosphoinositide kinase (EC
           2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase)
           (PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235)
          Length = 430

 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/313 (67%), Positives = 245/313 (78%), Gaps = 7/313 (2%)

Query: 213 KVVRAVPKVETSEDTSGGVQKFRVKLLPEGAGSPMDVLCQVGLDGIRMLDPNTSRTLRIY 272
           K+ RAVPK E+ ED +GG QKFRVKLLPEGAGSP DVLCQ+GLDGIRMLDP+TSRTLRIY
Sbjct: 123 KIARAVPKAESHEDANGGAQKFRVKLLPEGAGSPTDVLCQIGLDGIRMLDPSTSRTLRIY 182

Query: 273 PLETVTRWDVLDSSIFAFWSKSSVDFEARRIRLKSNSYTTNTILDTVTAASVQFKEMGGX 332
           PL+T+TRWDVLDS++FAFW+K+ VDFEA+RIRLKSNSYT+NT+LDTVTAA+VQFKE+GG 
Sbjct: 183 PLDTLTRWDVLDSTVFAFWAKTPVDFEAKRIRLKSNSYTSNTLLDTVTAATVQFKEIGG- 241

Query: 333 XXXXXXXXXXXXKPPEQQNDRRKNFLDWRNLMKPMNEEKDHWVPDEAVTKCTACTADFSA 392
                       KP  Q N+++K F DW    KP++E KDHWVPDEA  KC +C  DFS 
Sbjct: 242 -DARGRGTVDSSKPMSQSNEKKKGF-DWM-FAKPVDEVKDHWVPDEAAKKCYSCAVDFSP 298

Query: 393 FNRRHHCRNCGDIFCDKCTQGRTPLTTDADAQPVRVCDRCMAEVSQRLNNAREAANR-PI 451
           FNRRHHCRNCG+IFCDKC+QGRT LT + +A  VRVCDRCMAEVSQRL+ A+EAANR   
Sbjct: 299 FNRRHHCRNCGEIFCDKCSQGRTALTAEDNAPLVRVCDRCMAEVSQRLSIAQEAANRSAT 358

Query: 452 VHSHEDLAKKLKDAMDINKKXXXXXXXXXXXXXXXXXEVACPTCTVHLQVQVPTSGSETI 511
           V SHEDLA+KLK+ M+ N+K                 EVACPTCTVHLQVQVPTSGSET+
Sbjct: 359 VQSHEDLARKLKEEMERNRK--SSGSASGGSSGTRMREVACPTCTVHLQVQVPTSGSETV 416

Query: 512 ECGVCQQPFLVSA 524
           ECGVCQ  F VSA
Sbjct: 417 ECGVCQHAFRVSA 429



>Os03g0669800 Zinc finger, FYVE-type domain containing protein
          Length = 914

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 3/59 (5%)

Query: 374 WVPDEAVTKCTACTADFSAFNRRHHCRNCGDIFCDKCTQGRTPLTTDADAQPVRVCDRC 432
           WV D   T C  C+  FS F R+HHC+ CG +FC  CTQ R  L    D+ PVR+CD C
Sbjct: 18  WVVD--ATHCQGCSVQFSLFTRKHHCQRCGGLFCSNCTQQRMVLRGQGDS-PVRICDPC 73



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.132    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,910,562
Number of extensions: 666376
Number of successful extensions: 2696
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2701
Number of HSP's successfully gapped: 4
Length of query: 525
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 420
Effective length of database: 11,553,331
Effective search space: 4852399020
Effective search space used: 4852399020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)