BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0712300 Os06g0712300|AK070744
(556 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0712300 Phospholipid/glycerol acyltransferase domain c... 1041 0.0
Os05g0357800 Phospholipid/glycerol acyltransferase domain c... 149 6e-36
AK102755 126 5e-29
>Os06g0712300 Phospholipid/glycerol acyltransferase domain containing protein
Length = 556
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/556 (91%), Positives = 508/556 (91%)
Query: 1 MASRNXXXXXXXXXXXXXXISPTPTTXXXXXXXXXXXXXEESPTVCXXXXXXXXXPFAFL 60
MASRN ISPTPTT EESPTVC PFAFL
Sbjct: 1 MASRNPSPASLSTPLLSDSISPTPTTNGHAGHHNHDDDDEESPTVCGGDGGGGGDPFAFL 60
Query: 61 SEDRPAWWSPRGVSPADPFRNGTPGWCGAYELVRALVCAPVAAARLVLFGLSIAVGYAAT 120
SEDRPAWWSPRGVSPADPFRNGTPGWCGAYELVRALVCAPVAAARLVLFGLSIAVGYAAT
Sbjct: 61 SEDRPAWWSPRGVSPADPFRNGTPGWCGAYELVRALVCAPVAAARLVLFGLSIAVGYAAT 120
Query: 121 WVALRGWVDVRERAAQEGAGPMPAWRRRLMWITRISARCILFSFGYHWIRRKGKPAPREL 180
WVALRGWVDVRERAAQEGAGPMPAWRRRLMWITRISARCILFSFGYHWIRRKGKPAPREL
Sbjct: 121 WVALRGWVDVRERAAQEGAGPMPAWRRRLMWITRISARCILFSFGYHWIRRKGKPAPREL 180
Query: 181 APIVVSNHVSYIEPIYFFYELFPTIVSSDSHDSIPFVGTIIRAMQVIYVDRFSPASRKSA 240
APIVVSNHVSYIEPIYFFYELFPTIVSSDSHDSIPFVGTIIRAMQVIYVDRFSPASRKSA
Sbjct: 181 APIVVSNHVSYIEPIYFFYELFPTIVSSDSHDSIPFVGTIIRAMQVIYVDRFSPASRKSA 240
Query: 241 VNEIKRKAACNSFPRVLLFPEGTTTNGRFLISFQHGAFIPGYPVQPVIVRYPHVHFDQSW 300
VNEIKRKAACNSFPRVLLFPEGTTTNGRFLISFQHGAFIPGYPVQPVIVRYPHVHFDQSW
Sbjct: 241 VNEIKRKAACNSFPRVLLFPEGTTTNGRFLISFQHGAFIPGYPVQPVIVRYPHVHFDQSW 300
Query: 301 GNISLGKLMFKMFTQFHNFMEVEYLPVVYPPEIKQENALHFAENTSYAMAHALNVIPTSY 360
GNISLGKLMFKMFTQFHNFMEVEYLPVVYPPEIKQENALHFAENTSYAMAHALNVIPTSY
Sbjct: 301 GNISLGKLMFKMFTQFHNFMEVEYLPVVYPPEIKQENALHFAENTSYAMAHALNVIPTSY 360
Query: 361 SYGDSMIMARAVEDGKVNCSNYMVEMAWVKETYGVSTSEAMALLEDFLCMSPDKDGRVNA 420
SYGDSMIMARAVEDGKVNCSNYMVEMAWVKETYGVSTSEAMALLEDFLCMSPDKDGRVNA
Sbjct: 361 SYGDSMIMARAVEDGKVNCSNYMVEMAWVKETYGVSTSEAMALLEDFLCMSPDKDGRVNA 420
Query: 421 QDFWAHFGLNCTPLCKKIFQYFDFEAKESITFRQFLIGCAHLRKQPSFQDACETAFERCR 480
QDFWAHFGLNCTPLCKKIFQYFDFEAKESITFRQFLIGCAHLRKQPSFQDACETAFERCR
Sbjct: 421 QDFWAHFGLNCTPLCKKIFQYFDFEAKESITFRQFLIGCAHLRKQPSFQDACETAFERCR 480
Query: 481 NPLTSHIGREQLADVLRSSMLELMTDNGMMKLFKTLXXXXXXXXXXXXLMASLRKLPFMI 540
NPLTSHIGREQLADVLRSSMLELMTDNGMMKLFKTL LMASLRKLPFMI
Sbjct: 481 NPLTSHIGREQLADVLRSSMLELMTDNGMMKLFKTLDVDDDDGISKDDLMASLRKLPFMI 540
Query: 541 ALFAGRINGEVYIEIV 556
ALFAGRINGEVYIEIV
Sbjct: 541 ALFAGRINGEVYIEIV 556
>Os05g0357800 Phospholipid/glycerol acyltransferase domain containing protein
Length = 404
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 18/238 (7%)
Query: 137 EGAGPMPAWRRR-LMWITRISARCILFSFGYHWIRR----------KGKPAPRELA--PI 183
+G + WRR ++ R AR +LF FG++WIR + + +EL
Sbjct: 136 DGYARLEGWRREGVVRCGRALARAMLFVFGFYWIREYDCRFPDAEDEHQEQSKELGRPGA 195
Query: 184 VVSNHVSYIEPIYFFYELFPTIVSSDSHDSIPFVGTIIRAMQVIYVDRFSPASR----KS 239
VVSNHVSY++ +Y FP+ V+ S +P VG I + + I+V R S S
Sbjct: 196 VVSNHVSYVDILYHMSSSFPSFVAKRSVARLPMVGLISKCLGCIFVQRESKTSDFKGVSG 255
Query: 240 AVNE-IKRKAACNSFPRVLLFPEGTTTNGRFLISFQHGAFIPGYPVQPVIVRYPHVHFDQ 298
AV E I+R + P +LLFPEGTTTNG +L+ F+ GAF+ PV+PVI+RYP+ F
Sbjct: 256 AVTERIQRAHQQKNSPMMLLFPEGTTTNGDYLLPFKTGAFLAKAPVKPVILRYPYKRFSP 315
Query: 299 SWGNISLGKLMFKMFTQFHNFMEVEYLPVVYPPEIKQENALHFAENTSYAMAHALNVI 356
+W ++S + +F + QF N +EV +LPV YP E ++E+ +A N MA N+I
Sbjct: 316 AWDSMSGARHVFLLLCQFVNNLEVIHLPVYYPSEQEKEDPKLYANNVRKLMAVEGNLI 373
>AK102755
Length = 225
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 5/190 (2%)
Query: 172 KGKPAPRELAPIVVSNHVSYIEPIYFFYELFPTIVSSDSHDSIPFVGTIIRAMQVIYVDR 231
+G+ EL +VSNHVSY++ +Y FP+ V+ +S +P VG I + + I+V R
Sbjct: 8 QGQSEELELPGAIVSNHVSYVDILYHMSVSFPSFVAKESVSRLPLVGLISKCLGCIFVQR 67
Query: 232 FSPASRKSAVN-----EIKRKAACNSFPRVLLFPEGTTTNGRFLISFQHGAFIPGYPVQP 286
S AS V+ ++ + +LLFPEGTTT+G +L+ F+ GAF+ PVQP
Sbjct: 68 ESKASDSKGVSGAVTERVQEAYQDKNSSMMLLFPEGTTTDGDYLLPFRTGAFLARVPVQP 127
Query: 287 VIVRYPHVHFDQSWGNISLGKLMFKMFTQFHNFMEVEYLPVVYPPEIKQENALHFAENTS 346
VI+RYP+ F +W ++ + +F + QF N++EV LPV P E ++E+ +A N
Sbjct: 128 VILRYPYTMFSPAWDSMDGARHVFLLLCQFVNYIEVVRLPVYCPSEQEKEDPKLYANNVR 187
Query: 347 YAMAHALNVI 356
+A N+I
Sbjct: 188 KLIATEGNLI 197
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.137 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,827,533
Number of extensions: 738847
Number of successful extensions: 2118
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2116
Number of HSP's successfully gapped: 3
Length of query: 556
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 450
Effective length of database: 11,501,117
Effective search space: 5175502650
Effective search space used: 5175502650
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 159 (65.9 bits)