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Os05g0357800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Phospholipid/glycerol acyltransferase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.1 (0.0156) R2 : 0.522
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.771 (0.0387) R2dC : 0.416 R2C : 0.398
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.314 (0.0329) R2dN8 : 0.124 R2N8 : 0.106
σ : 0.294
deviance : 39.61
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_____
C
peak time of C : 2.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.67 0.243 12 0.198 0.535 -1.04 0.544 0.577 0.472 1.81 10.08 270 -- --
26.88 0.241 12 0.106 0.533 -1.03 0.465 -- 0.449 1.76 11.17 269 -- --
27.67 0.245 12 0.117 0.534 -1.03 -- 0.128 0.454 1.75 14.7 269 -- --
27.68 0.245 12 0.0984 0.528 -1.03 -- -- 0.449 1.75 14.7 269 -- --
38.01 0.287 12 0.26 -- -1.4 -- 0.274 0.547 -- 17.05 115 -- --
37.93 0.289 12.1 -0.113 0.771 -- 0.602 -- 0.303 2.79 -- -- -- --
39.19 0.293 12.1 -0.127 0.774 -- -- -- 0.3 2.8 -- -- -- --
37.86 0.287 12 0.204 -- -1.46 -- -- 0.529 -- 16 87 -- --
27.91 0.246 12 -- 0.534 -1.01 -- -- 0.434 1.81 14.6 269 -- --
73.87 0.402 12.1 -0.0941 -- -- -- -- 0.32 -- -- -- -- --
39.61 0.294 12.1 -- 0.771 -- -- -- 0.314 2.8 -- -- -- --
36.71 0.283 12 -- -- -1.21 -- -- 0.445 -- 24.02 53 -- --
74.11 0.402 12.1 -- -- -- -- -- 0.33 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.00 temperature 20 270 > th dose dependent rect. 3 15
5 24.48 temperature 10 270 > th dose dependent sin 0 NA
10 24.69 temperature 30 270 < th dose dependent sin 23 NA
24 25.11 temperature 30 270 < th dose dependent rect. 7 14
74 25.91 temperature 10 720 > th dose dependent sin 4 NA
89 25.97 temperature 15 270 > th dose dependent rect. 19 23
94 26.01 temperature 15 720 > th dose dependent rect. 21 18
168 26.33 temperature 30 720 < th dose dependent sin 3 NA
175 26.35 temperature 10 720 > th dose dependent rect. 4 9
220 26.48 temperature 30 720 < th dose dependent rect. 2 14
283 26.67 temperature 10 270 > th dose dependent no NA NA
297 26.70 temperature 20 30 > th dose dependent rect. 1 21
300 26.70 temperature 15 30 > th dose dependent rect. 23 23
318 26.75 temperature 30 270 < th dose dependent rect. 5 22
369 26.85 temperature 15 270 > th dose dependent rect. 10 23
387 26.90 temperature 30 720 < th dose dependent rect. 7 7
425 26.96 temperature 15 270 > th dose dependent rect. 8 23
450 27.03 humidity 70 270 > th dose dependent rect. 7 14
499 27.15 temperature 30 270 < th dose dependent rect. 2 23
506 27.16 temperature 30 270 < th dose dependent rect. 24 23
526 27.18 temperature 15 270 > th dose dependent rect. 12 23
527 27.19 temperature 30 720 < th dose dependent rect. 7 4
633 27.37 temperature 10 1440 > th dose dependent rect. 11 1
691 27.43 temperature 30 270 < th dose dependent rect. 22 23
693 27.44 temperature 15 1440 > th dose dependent rect. 10 3
717 27.47 temperature 10 1440 > th dose dependent rect. 9 5
738 27.49 temperature 30 270 < th dose dependent no NA NA
744 27.49 humidity 60 14400 < th dose dependent rect. 16 17
810 27.54 temperature 30 270 < th dose dependent rect. 17 23
870 27.60 temperature 30 270 < th dose dependent rect. 20 23
927 27.66 humidity 60 14400 < th dose dependent rect. 16 4
982 27.70 temperature 30 270 < th dose dependent rect. 15 23