BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0649900 Os06g0649900|AK122015
         (512 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0649900  Phospholipase D/Transphosphatidylase domain co...  1006   0.0  

>Os06g0649900 Phospholipase D/Transphosphatidylase domain containing protein
          Length = 512

 Score = 1006 bits (2600), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/484 (100%), Positives = 484/484 (100%)

Query: 29  EVATCKAWLVQSIPTDMPHLRRVPGVLSTADVLQWLSGNATKSLDVLAQYWQFLAQPKNP 88
           EVATCKAWLVQSIPTDMPHLRRVPGVLSTADVLQWLSGNATKSLDVLAQYWQFLAQPKNP
Sbjct: 29  EVATCKAWLVQSIPTDMPHLRRVPGVLSTADVLQWLSGNATKSLDVLAQYWQFLAQPKNP 88

Query: 89  KSGDYGYSESEMVRFGADKGQRVYKALEKAADRKIKIRIVQHSGFAPDFDKESADLAAGR 148
           KSGDYGYSESEMVRFGADKGQRVYKALEKAADRKIKIRIVQHSGFAPDFDKESADLAAGR
Sbjct: 89  KSGDYGYSESEMVRFGADKGQRVYKALEKAADRKIKIRIVQHSGFAPDFDKESADLAAGR 148

Query: 149 PNVQNVTLLFGDWWGSGVVHAKVWISDKKDVYIGSANNDWKSLSQVKELGIYFADCPQIA 208
           PNVQNVTLLFGDWWGSGVVHAKVWISDKKDVYIGSANNDWKSLSQVKELGIYFADCPQIA
Sbjct: 149 PNVQNVTLLFGDWWGSGVVHAKVWISDKKDVYIGSANNDWKSLSQVKELGIYFADCPQIA 208

Query: 209 KTVEIYFQNLWKLSTLNSTAYTKVAWDKQWQAFRKVPCWSHFLKPEERCRSPLPPSVDVP 268
           KTVEIYFQNLWKLSTLNSTAYTKVAWDKQWQAFRKVPCWSHFLKPEERCRSPLPPSVDVP
Sbjct: 209 KTVEIYFQNLWKLSTLNSTAYTKVAWDKQWQAFRKVPCWSHFLKPEERCRSPLPPSVDVP 268

Query: 269 YVDGYPSLANPKMLDFSFETPGYKSSTKEHHLSYLSYAPPELSFDKFQADEQGWLDTIKS 328
           YVDGYPSLANPKMLDFSFETPGYKSSTKEHHLSYLSYAPPELSFDKFQADEQGWLDTIKS
Sbjct: 269 YVDGYPSLANPKMLDFSFETPGYKSSTKEHHLSYLSYAPPELSFDKFQADEQGWLDTIKS 328

Query: 329 VKFGGVVRISTMDWLGQSQYATQTVFWPSLSSAISEVIFSKNATVRILVAYWTHFIPNTE 388
           VKFGGVVRISTMDWLGQSQYATQTVFWPSLSSAISEVIFSKNATVRILVAYWTHFIPNTE
Sbjct: 329 VKFGGVVRISTMDWLGQSQYATQTVFWPSLSSAISEVIFSKNATVRILVAYWTHFIPNTE 388

Query: 389 KYLKSLLYSNILCTSSSYNHCMGKVEIKYYVVPGYNKTGPALAQGAATGNRYPDFTRVNH 448
           KYLKSLLYSNILCTSSSYNHCMGKVEIKYYVVPGYNKTGPALAQGAATGNRYPDFTRVNH
Sbjct: 389 KYLKSLLYSNILCTSSSYNHCMGKVEIKYYVVPGYNKTGPALAQGAATGNRYPDFTRVNH 448

Query: 449 GKYAVSDVRANIGTSNLIWDYFYTTAGVSFGTYSPAIVSQLQDIFDADWFSPYTVPVKPL 508
           GKYAVSDVRANIGTSNLIWDYFYTTAGVSFGTYSPAIVSQLQDIFDADWFSPYTVPVKPL
Sbjct: 449 GKYAVSDVRANIGTSNLIWDYFYTTAGVSFGTYSPAIVSQLQDIFDADWFSPYTVPVKPL 508

Query: 509 EASA 512
           EASA
Sbjct: 509 EASA 512



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.133    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,142,561
Number of extensions: 711022
Number of successful extensions: 1521
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 1521
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 407
Effective length of database: 11,553,331
Effective search space: 4702205717
Effective search space used: 4702205717
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)