BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0115100 Os06g0115100|AK059160
         (77 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0115100  Similar to ATOZI1 protein (Stress-induced prot...   159   3e-40
Os11g0161033  Protein of unknown function DUF1138 family pro...   154   1e-38
Os06g0114500  Similar to ATOZI1 protein (Stress-induced prot...   130   2e-31
Os02g0609200  Similar to ATOZI1 protein (Stress-induced prot...   102   5e-23
Os04g0497300  Protein of unknown function DUF1138 family pro...    96   5e-21

>Os06g0115100 Similar to ATOZI1 protein (Stress-induced protein OZI1) (AT0ZI1
          protein)
          Length = 77

 Score =  159 bits (403), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 77/77 (100%), Positives = 77/77 (100%)

Query: 1  MTAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVSDKEWWQATDTKFQAWPRTAGP 60
          MTAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVSDKEWWQATDTKFQAWPRTAGP
Sbjct: 1  MTAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVSDKEWWQATDTKFQAWPRTAGP 60

Query: 61 PVIMNPISRQNFIVKST 77
          PVIMNPISRQNFIVKST
Sbjct: 61 PVIMNPISRQNFIVKST 77



>Os11g0161033 Protein of unknown function DUF1138 family protein
          Length = 78

 Score =  154 bits (389), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/76 (97%), Positives = 75/76 (98%)

Query: 1  MTAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVSDKEWWQATDTKFQAWPRTAGP 60
          MTAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVS+KEWW ATDTKFQAWPRTAGP
Sbjct: 1  MTAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVSEKEWWLATDTKFQAWPRTAGP 60

Query: 61 PVIMNPISRQNFIVKS 76
          PVIMNPISRQNFIVKS
Sbjct: 61 PVIMNPISRQNFIVKS 76



>Os06g0114500 Similar to ATOZI1 protein (Stress-induced protein OZI1) (AT0ZI1
          protein)
          Length = 79

 Score =  130 bits (327), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 58/75 (77%), Positives = 65/75 (86%)

Query: 1  MTAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVSDKEWWQATDTKFQAWPRTAGP 60
          M   YIA  LVGSFAI+Y+CD F+++KK FGG+ P TVSDKEWWQATD KFQAWPRTAGP
Sbjct: 1  MAGKYIAAGLVGSFAISYVCDHFIAEKKIFGGTTPHTVSDKEWWQATDKKFQAWPRTAGP 60

Query: 61 PVIMNPISRQNFIVK 75
          PV+MNPISRQNFIVK
Sbjct: 61 PVVMNPISRQNFIVK 75



>Os02g0609200 Similar to ATOZI1 protein (Stress-induced protein OZI1) (AT0ZI1
          protein)
          Length = 78

 Score =  102 bits (255), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 58/77 (75%)

Query: 1  MTAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVSDKEWWQATDTKFQAWPRTAGP 60
          M   YI GS+  SFA AY+C+ ++++ K  GG+  +T++  EW + TD KFQAWPRTAGP
Sbjct: 1  MATKYIIGSVAASFAFAYVCEIYIAEGKLLGGTTTRTMATDEWGKETDKKFQAWPRTAGP 60

Query: 61 PVIMNPISRQNFIVKST 77
          PV+MNP+ RQNFIVKS+
Sbjct: 61 PVVMNPVRRQNFIVKSS 77



>Os04g0497300 Protein of unknown function DUF1138 family protein
          Length = 101

 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 53/74 (71%)

Query: 1  MTAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVSDKEWWQATDTKFQAWPRTAGP 60
          M   YI GS+  SFA AY+C  + +DKK  GG+ P+TV+DKEW + T+ K  AWPR AG 
Sbjct: 13 MATKYIVGSVTASFAFAYVCGVYFADKKVLGGTTPRTVADKEWGKVTEEKLDAWPRVAGK 72

Query: 61 PVIMNPISRQNFIV 74
          PV MNP++RQN+++
Sbjct: 73 PVSMNPVTRQNYVL 86



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.132    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,799,474
Number of extensions: 102293
Number of successful extensions: 247
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 247
Number of HSP's successfully gapped: 5
Length of query: 77
Length of database: 17,035,801
Length adjustment: 48
Effective length of query: 29
Effective length of database: 14,529,529
Effective search space: 421356341
Effective search space used: 421356341
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 149 (62.0 bits)